Gene : Glyma.19G102200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03879 - Cgr1 family (Cgr1) Genomic Order:  1022
Name:  ? Glyma.19G102200 Secondary Identifier:  ? PAC:30515258
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G102200 0.5kb upstream 0.5kb upstream 1609 true Chr19: 35024082-35025690 Glycine max
Glyma.19G102200 0.5kb upstream 0.5kb upstream 500 false Chr19: 35024082-35024581 Glycine max
Glyma.19G102200 0.5kb downstream 0.5kb downstream 1609 true Chr19: 35024582-35026190 Glycine max
Glyma.19G102200 0.5kb downstream 0.5kb downstream 500 false Chr19: 35025691-35026190 Glycine max
Glyma.19G102200 1.0kb upstream 1.0kb upstream 2109 true Chr19: 35023582-35025690 Glycine max
Glyma.19G102200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35023582-35024581 Glycine max
Glyma.19G102200 1.0kb downstream 1.0kb downstream 2109 true Chr19: 35024582-35026690 Glycine max
Glyma.19G102200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35025691-35026690 Glycine max
Glyma.19G102200 2.0kb upstream 2.0kb upstream 3109 true Chr19: 35022582-35025690 Glycine max
Glyma.19G102200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35022582-35024581 Glycine max
Glyma.19G102200 2.0kb downstream 2.0kb downstream 3109 true Chr19: 35024582-35027690 Glycine max
Glyma.19G102200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35025691-35027690 Glycine max
Glyma.19G102200 5.0kb upstream 5.0kb upstream 6109 true Chr19: 35019582-35025690 Glycine max
Glyma.19G102200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35019582-35024581 Glycine max
Glyma.19G102200 5.0kb downstream 5.0kb downstream 6109 true Chr19: 35024582-35030690 Glycine max
Glyma.19G102200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35025691-35030690 Glycine max
Glyma.19G102200 10.0kb upstream 10.0kb upstream 11109 true Chr19: 35014582-35025690 Glycine max
Glyma.19G102200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35014582-35024581 Glycine max
Glyma.19G102200 10.0kb downstream 10.0kb downstream 11109 true Chr19: 35024582-35035690 Glycine max
Glyma.19G102200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35025691-35035690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307427 5265 Fabidae View MSA
124066001 5270 Rosid View MSA
123746651 5271 Pentapetalae View MSA
122786473 5272 Eudicot View MSA
122044383 5273 Angiosperm View MSA
121348750 5274 Embryophyte View MSA
123426387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3734 0.0 28.6995    
cufflinks 8.77184 0.0 24.7601    
cufflinks 2.81412 0.0 9.2953   Low
cufflinks 7.71467 0.0 22.0478    
cufflinks 9.97229 0.0 27.5957    
cufflinks 6.63644 0.0 19.295    
cufflinks 9.27537 0.0 25.927    
cufflinks 11.3847 0.0 31.3505    
cufflinks 7.3547 0.0 21.1433    
cufflinks 6.165        
cufflinks 2.151       Low
cufflinks 4.682        
cufflinks 6.207        
cufflinks 11.025     High High
cufflinks 2.225       Low
cufflinks 6.12        
cufflinks 6.902     High  
cufflinks 5.582        
cufflinks 6.806        
cufflinks 4.37        
cufflinks 2.621       Low
cufflinks 4.201        
cufflinks 6.167        
cufflinks 2.664       Low
cufflinks 4.068        
cufflinks 4.387        

0 Strain