Gene : Glyma.03G152800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11514:SF28 - TRANSCRIPTION FACTOR TT8 Genomic Order:  1528
Name:  ? Glyma.03G152800 Secondary Identifier:  ? PAC:30517606
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G152800 0.5kb upstream 0.5kb upstream 8554 true Chr03: 36781745-36790298 Glycine max
Glyma.03G152800 0.5kb upstream 0.5kb upstream 500 false Chr03: 36781745-36782244 Glycine max
Glyma.03G152800 0.5kb downstream 0.5kb downstream 8554 true Chr03: 36782245-36790798 Glycine max
Glyma.03G152800 0.5kb downstream 0.5kb downstream 500 false Chr03: 36790299-36790798 Glycine max
Glyma.03G152800 1.0kb upstream 1.0kb upstream 9054 true Chr03: 36781245-36790298 Glycine max
Glyma.03G152800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36781245-36782244 Glycine max
Glyma.03G152800 1.0kb downstream 1.0kb downstream 9054 true Chr03: 36782245-36791298 Glycine max
Glyma.03G152800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36790299-36791298 Glycine max
Glyma.03G152800 2.0kb upstream 2.0kb upstream 10054 true Chr03: 36780245-36790298 Glycine max
Glyma.03G152800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36780245-36782244 Glycine max
Glyma.03G152800 2.0kb downstream 2.0kb downstream 10054 true Chr03: 36782245-36792298 Glycine max
Glyma.03G152800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36790299-36792298 Glycine max
Glyma.03G152800 5.0kb upstream 5.0kb upstream 13054 true Chr03: 36777245-36790298 Glycine max
Glyma.03G152800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36777245-36782244 Glycine max
Glyma.03G152800 5.0kb downstream 5.0kb downstream 13054 true Chr03: 36782245-36795298 Glycine max
Glyma.03G152800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36790299-36795298 Glycine max
Glyma.03G152800 10.0kb upstream 10.0kb upstream 18054 true Chr03: 36772245-36790298 Glycine max
Glyma.03G152800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36772245-36782244 Glycine max
Glyma.03G152800 10.0kb downstream 10.0kb downstream 18054 true Chr03: 36782245-36800298 Glycine max
Glyma.03G152800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36790299-36800298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309352 5265 Fabidae View MSA
124064809 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0386266 0.0 0.16177 Low Low
cufflinks 0.927249 0.0 6.07908    
cufflinks 0.146614 0.0 1.19331 Low  
cufflinks 0.0970099 0.0 0.380271 Low  
cufflinks 0.931762 0.0 6.69633    
cufflinks 0.191322 0.0 1.4115 Low  
cufflinks 0.0776372 0.0 0.820434 Low  
cufflinks 2.80285 0.0 11.8196   High
cufflinks 0.740393 0.0 4.95878    
cufflinks 0.11       High
cufflinks 0.015     Low  
cufflinks 0.02     Low  
cufflinks 0.012     Low  
cufflinks 0.002     Low Low
cufflinks 0.009     Low Low
cufflinks 0.073     Low  
cufflinks 0.091        
cufflinks 0.011     Low  
cufflinks 0.087     Low  
cufflinks 0.124       High
cufflinks 0.02     Low  
cufflinks 0.101        
cufflinks 0.074     Low  
cufflinks 0.023     Low  
cufflinks 0.077     Low  
cufflinks 0.028     Low  

0 Strain