Gene : Glyma.03G157300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10015//PTHR10015:SF160 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  1573
Name:  ? Glyma.03G157300 Secondary Identifier:  ? PAC:30519353
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G157300 0.5kb upstream 0.5kb upstream 4192 true Chr03: 37267395-37271586 Glycine max
Glyma.03G157300 0.5kb upstream 0.5kb upstream 500 false Chr03: 37267395-37267894 Glycine max
Glyma.03G157300 0.5kb downstream 0.5kb downstream 4192 true Chr03: 37267895-37272086 Glycine max
Glyma.03G157300 0.5kb downstream 0.5kb downstream 500 false Chr03: 37271587-37272086 Glycine max
Glyma.03G157300 1.0kb upstream 1.0kb upstream 4692 true Chr03: 37266895-37271586 Glycine max
Glyma.03G157300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37266895-37267894 Glycine max
Glyma.03G157300 1.0kb downstream 1.0kb downstream 4692 true Chr03: 37267895-37272586 Glycine max
Glyma.03G157300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37271587-37272586 Glycine max
Glyma.03G157300 2.0kb upstream 2.0kb upstream 5692 true Chr03: 37265895-37271586 Glycine max
Glyma.03G157300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37265895-37267894 Glycine max
Glyma.03G157300 2.0kb downstream 2.0kb downstream 5692 true Chr03: 37267895-37273586 Glycine max
Glyma.03G157300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37271587-37273586 Glycine max
Glyma.03G157300 5.0kb upstream 5.0kb upstream 8692 true Chr03: 37262895-37271586 Glycine max
Glyma.03G157300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37262895-37267894 Glycine max
Glyma.03G157300 5.0kb downstream 5.0kb downstream 8692 true Chr03: 37267895-37276586 Glycine max
Glyma.03G157300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37271587-37276586 Glycine max
Glyma.03G157300 10.0kb upstream 10.0kb upstream 13692 true Chr03: 37257895-37271586 Glycine max
Glyma.03G157300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37257895-37267894 Glycine max
Glyma.03G157300 10.0kb downstream 10.0kb downstream 13692 true Chr03: 37267895-37281586 Glycine max
Glyma.03G157300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37271587-37281586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245104 5265 Fabidae Singleton cluster - no MSA
124062717 5270 Rosid View MSA
123744763 5271 Pentapetalae View MSA
122793858 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95219 0.0 8.69213    
cufflinks 1.28183 0.0 6.17179    
cufflinks 0.821192 0.0 4.42583    
cufflinks 0.728837 0.0 4.10655    
cufflinks 3.01172 0.0 11.1162   High
cufflinks 0.432817 0.0 2.63712    
cufflinks 0.134129 0.0 0.522161 Low Low
cufflinks 0.714866 0.0 3.87329    
cufflinks 4.24028 0.0 16.6776   High
cufflinks 0.067     Low Low
cufflinks 5.384       High
cufflinks 0.44        
cufflinks 0.224        
cufflinks 0.291        
cufflinks 3.045       High
cufflinks 0.331        
cufflinks 1.175        
cufflinks 0.291        
cufflinks 0.312        
cufflinks 0.211        
cufflinks 2.357       High
cufflinks 0.483        
cufflinks 1.583        
cufflinks 0.823        
cufflinks 0.359        
cufflinks 1.933        

0 Strain