Gene : Glyma.03G162600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1626
Name:  ? Glyma.03G162600 Secondary Identifier:  ? PAC:30516105
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G162600 0.5kb upstream 0.5kb upstream 1267 true Chr03: 37741257-37742523 Glycine max
Glyma.03G162600 0.5kb upstream 0.5kb upstream 500 false Chr03: 37742024-37742523 Glycine max
Glyma.03G162600 0.5kb downstream 0.5kb downstream 1267 true Chr03: 37740757-37742023 Glycine max
Glyma.03G162600 0.5kb downstream 0.5kb downstream 500 false Chr03: 37740757-37741256 Glycine max
Glyma.03G162600 1.0kb upstream 1.0kb upstream 1767 true Chr03: 37741257-37743023 Glycine max
Glyma.03G162600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37742024-37743023 Glycine max
Glyma.03G162600 1.0kb downstream 1.0kb downstream 1767 true Chr03: 37740257-37742023 Glycine max
Glyma.03G162600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37740257-37741256 Glycine max
Glyma.03G162600 2.0kb upstream 2.0kb upstream 2767 true Chr03: 37741257-37744023 Glycine max
Glyma.03G162600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37742024-37744023 Glycine max
Glyma.03G162600 2.0kb downstream 2.0kb downstream 2767 true Chr03: 37739257-37742023 Glycine max
Glyma.03G162600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37739257-37741256 Glycine max
Glyma.03G162600 5.0kb upstream 5.0kb upstream 5767 true Chr03: 37741257-37747023 Glycine max
Glyma.03G162600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37742024-37747023 Glycine max
Glyma.03G162600 5.0kb downstream 5.0kb downstream 5767 true Chr03: 37736257-37742023 Glycine max
Glyma.03G162600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37736257-37741256 Glycine max
Glyma.03G162600 10.0kb upstream 10.0kb upstream 10767 true Chr03: 37741257-37752023 Glycine max
Glyma.03G162600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37742024-37752023 Glycine max
Glyma.03G162600 10.0kb downstream 10.0kb downstream 10767 true Chr03: 37731257-37742023 Glycine max
Glyma.03G162600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37731257-37741256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312350 5265 Fabidae View MSA
124071371 5270 Rosid View MSA
123752918 5271 Pentapetalae View MSA
122793909 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0754503 0.0 0.321531 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0695768 0.0 0.297694 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0937223 0.0 0.392213 Low  
cufflinks 0.766584 0.0 2.92442   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.529       High
cufflinks 0.021     Low Low
cufflinks 0.192        
cufflinks 0.286        
cufflinks 0.17        
cufflinks 0.291        
cufflinks 2.963       High
cufflinks 0.033     Low Low
cufflinks 0.083     Low  
cufflinks 0.095        
cufflinks 1.1        
cufflinks 0.092     Low  
cufflinks 0.267        
cufflinks 6.693     High High
cufflinks 0.167        
cufflinks 0.985        

0 Strain