Gene : Glyma.03G161500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  1615
Name:  ? Glyma.03G161500 Secondary Identifier:  ? PAC:30517346
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G161500 0.5kb upstream 0.5kb upstream 1652 true Chr03: 37656499-37658150 Glycine max
Glyma.03G161500 0.5kb upstream 0.5kb upstream 500 false Chr03: 37657651-37658150 Glycine max
Glyma.03G161500 0.5kb downstream 0.5kb downstream 1652 true Chr03: 37655999-37657650 Glycine max
Glyma.03G161500 0.5kb downstream 0.5kb downstream 500 false Chr03: 37655999-37656498 Glycine max
Glyma.03G161500 1.0kb upstream 1.0kb upstream 2152 true Chr03: 37656499-37658650 Glycine max
Glyma.03G161500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37657651-37658650 Glycine max
Glyma.03G161500 1.0kb downstream 1.0kb downstream 2152 true Chr03: 37655499-37657650 Glycine max
Glyma.03G161500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37655499-37656498 Glycine max
Glyma.03G161500 2.0kb upstream 2.0kb upstream 3152 true Chr03: 37656499-37659650 Glycine max
Glyma.03G161500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37657651-37659650 Glycine max
Glyma.03G161500 2.0kb downstream 2.0kb downstream 3152 true Chr03: 37654499-37657650 Glycine max
Glyma.03G161500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37654499-37656498 Glycine max
Glyma.03G161500 5.0kb upstream 5.0kb upstream 6152 true Chr03: 37656499-37662650 Glycine max
Glyma.03G161500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37657651-37662650 Glycine max
Glyma.03G161500 5.0kb downstream 5.0kb downstream 6152 true Chr03: 37651499-37657650 Glycine max
Glyma.03G161500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37651499-37656498 Glycine max
Glyma.03G161500 10.0kb upstream 10.0kb upstream 11152 true Chr03: 37656499-37667650 Glycine max
Glyma.03G161500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37657651-37667650 Glycine max
Glyma.03G161500 10.0kb downstream 10.0kb downstream 11152 true Chr03: 37646499-37657650 Glycine max
Glyma.03G161500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37646499-37656498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122313748 5265 Fabidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.10256 0.0 0.417809 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0135498 0.0 0.0651479 Low Low
cufflinks 2.17422 0.0 7.66349    
cufflinks 1.93769 0.0 6.88562    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.294978 0.0 1.15176    
cufflinks 0.704164 0.0 2.6497    
cufflinks 0.025     Low Low
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.211       High
cufflinks 0.706       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.019     Low Low
cufflinks 0.391        

0 Strain