Gene : Glyma.03G165000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33447:SF2 - PROTEIN PCS-1, ISOFORM A Genomic Order:  1650
Name:  ? Glyma.03G165000 Secondary Identifier:  ? PAC:30519262
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6745 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G165000 0.5kb upstream 0.5kb upstream 4078 true Chr03: 37987184-37991261 Glycine max
Glyma.03G165000 0.5kb upstream 0.5kb upstream 500 false Chr03: 37987184-37987683 Glycine max
Glyma.03G165000 0.5kb downstream 0.5kb downstream 4078 true Chr03: 37987684-37991761 Glycine max
Glyma.03G165000 0.5kb downstream 0.5kb downstream 500 false Chr03: 37991262-37991761 Glycine max
Glyma.03G165000 1.0kb upstream 1.0kb upstream 4578 true Chr03: 37986684-37991261 Glycine max
Glyma.03G165000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37986684-37987683 Glycine max
Glyma.03G165000 1.0kb downstream 1.0kb downstream 4578 true Chr03: 37987684-37992261 Glycine max
Glyma.03G165000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37991262-37992261 Glycine max
Glyma.03G165000 2.0kb upstream 2.0kb upstream 5578 true Chr03: 37985684-37991261 Glycine max
Glyma.03G165000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37985684-37987683 Glycine max
Glyma.03G165000 2.0kb downstream 2.0kb downstream 5578 true Chr03: 37987684-37993261 Glycine max
Glyma.03G165000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37991262-37993261 Glycine max
Glyma.03G165000 5.0kb upstream 5.0kb upstream 8578 true Chr03: 37982684-37991261 Glycine max
Glyma.03G165000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37982684-37987683 Glycine max
Glyma.03G165000 5.0kb downstream 5.0kb downstream 8578 true Chr03: 37987684-37996261 Glycine max
Glyma.03G165000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37991262-37996261 Glycine max
Glyma.03G165000 10.0kb upstream 10.0kb upstream 13578 true Chr03: 37977684-37991261 Glycine max
Glyma.03G165000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37977684-37987683 Glycine max
Glyma.03G165000 10.0kb downstream 10.0kb downstream 13578 true Chr03: 37987684-38001261 Glycine max
Glyma.03G165000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37991262-38001261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312285 5265 Fabidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.94061 0.0 11.5364    
cufflinks 3.90832 0.0 11.4588    
cufflinks 3.64193 0.0 10.7367    
cufflinks 6.39369 0.0 17.7238    
cufflinks 5.80487 0.0 16.2431    
cufflinks 5.91121 0.0 16.5087    
cufflinks 10.147 0.0 27.3142   High
cufflinks 3.58986 0.0 10.6238    
cufflinks 3.87039 0.0 11.3436    
cufflinks 2.604        
cufflinks 1.576       Low
cufflinks 3.039        
cufflinks 5.13       High
cufflinks 6.705     High High
cufflinks 0.923       Low
cufflinks 2.429        
cufflinks 2.477        
cufflinks 3.746        
cufflinks 2.961        
cufflinks 2.342        
cufflinks 2.004        
cufflinks 2.315        
cufflinks 2.436        
cufflinks 2.09        
cufflinks 2.444        
cufflinks 1.959        

0 Strain