Gene : Glyma.19G105700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Genomic Order:  1057
Name:  ? Glyma.19G105700 Secondary Identifier:  ? PAC:30512994
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G105700 0.5kb upstream 0.5kb upstream 2146 true Chr19: 35613941-35616086 Glycine max
Glyma.19G105700 0.5kb upstream 0.5kb upstream 500 false Chr19: 35613941-35614440 Glycine max
Glyma.19G105700 0.5kb downstream 0.5kb downstream 2146 true Chr19: 35614441-35616586 Glycine max
Glyma.19G105700 0.5kb downstream 0.5kb downstream 500 false Chr19: 35616087-35616586 Glycine max
Glyma.19G105700 1.0kb upstream 1.0kb upstream 2646 true Chr19: 35613441-35616086 Glycine max
Glyma.19G105700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35613441-35614440 Glycine max
Glyma.19G105700 1.0kb downstream 1.0kb downstream 2646 true Chr19: 35614441-35617086 Glycine max
Glyma.19G105700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35616087-35617086 Glycine max
Glyma.19G105700 2.0kb upstream 2.0kb upstream 3646 true Chr19: 35612441-35616086 Glycine max
Glyma.19G105700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35612441-35614440 Glycine max
Glyma.19G105700 2.0kb downstream 2.0kb downstream 3646 true Chr19: 35614441-35618086 Glycine max
Glyma.19G105700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35616087-35618086 Glycine max
Glyma.19G105700 5.0kb upstream 5.0kb upstream 6646 true Chr19: 35609441-35616086 Glycine max
Glyma.19G105700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35609441-35614440 Glycine max
Glyma.19G105700 5.0kb downstream 5.0kb downstream 6646 true Chr19: 35614441-35621086 Glycine max
Glyma.19G105700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35616087-35621086 Glycine max
Glyma.19G105700 10.0kb upstream 10.0kb upstream 11646 true Chr19: 35604441-35616086 Glycine max
Glyma.19G105700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35604441-35614440 Glycine max
Glyma.19G105700 10.0kb downstream 10.0kb downstream 11646 true Chr19: 35614441-35626086 Glycine max
Glyma.19G105700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35616087-35626086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.637 0.0 317.751 High  
cufflinks 105.236 0.0 295.195 High  
cufflinks 64.7411 0.0 174.923 High Low
cufflinks 56.1842 0.0 150.692 High Low
cufflinks 170.01 0.0 506.723 High High
cufflinks 122.902 0.0 351.708 High  
cufflinks 164.784 0.0 488.255 High High
cufflinks 84.8102 0.0 233.085 High  
cufflinks 100.317 0.0 280.291 High  
cufflinks 42.882     High  
cufflinks 11.037     High Low
cufflinks 37.744     High  
cufflinks 113.775     High High
cufflinks 157.411     High High
cufflinks 8.821     High Low
cufflinks 29.801     High  
cufflinks 33.343     High  
cufflinks 41.445     High  
cufflinks 56.364     High  
cufflinks 21.436     High  
cufflinks 17.267     High  
cufflinks 25.948     High  
cufflinks 54.478     High  
cufflinks 12.529     High Low
cufflinks 26.167     High  
cufflinks 25.846     High  

0 Strain