Gene : Glyma.19G106000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14025:SF21 - DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  1060
Name:  ? Glyma.19G106000 Secondary Identifier:  ? PAC:30511766
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G106000 0.5kb upstream 0.5kb upstream 22239 true Chr19: 35670023-35692261 Glycine max
Glyma.19G106000 0.5kb upstream 0.5kb upstream 500 false Chr19: 35670023-35670522 Glycine max
Glyma.19G106000 0.5kb downstream 0.5kb downstream 22239 true Chr19: 35670523-35692761 Glycine max
Glyma.19G106000 0.5kb downstream 0.5kb downstream 500 false Chr19: 35692262-35692761 Glycine max
Glyma.19G106000 1.0kb upstream 1.0kb upstream 22739 true Chr19: 35669523-35692261 Glycine max
Glyma.19G106000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35669523-35670522 Glycine max
Glyma.19G106000 1.0kb downstream 1.0kb downstream 22739 true Chr19: 35670523-35693261 Glycine max
Glyma.19G106000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35692262-35693261 Glycine max
Glyma.19G106000 2.0kb upstream 2.0kb upstream 23739 true Chr19: 35668523-35692261 Glycine max
Glyma.19G106000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35668523-35670522 Glycine max
Glyma.19G106000 2.0kb downstream 2.0kb downstream 23739 true Chr19: 35670523-35694261 Glycine max
Glyma.19G106000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35692262-35694261 Glycine max
Glyma.19G106000 5.0kb upstream 5.0kb upstream 26739 true Chr19: 35665523-35692261 Glycine max
Glyma.19G106000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35665523-35670522 Glycine max
Glyma.19G106000 5.0kb downstream 5.0kb downstream 26739 true Chr19: 35670523-35697261 Glycine max
Glyma.19G106000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35692262-35697261 Glycine max
Glyma.19G106000 10.0kb upstream 10.0kb upstream 31739 true Chr19: 35660523-35692261 Glycine max
Glyma.19G106000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35660523-35670522 Glycine max
Glyma.19G106000 10.0kb downstream 10.0kb downstream 31739 true Chr19: 35670523-35702261 Glycine max
Glyma.19G106000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35692262-35702261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299787 5265 Fabidae View MSA
124064201 5270 Rosid View MSA
123751738 5271 Pentapetalae View MSA
122788297 5272 Eudicot View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.368901 0.0 1.66427    
cufflinks 1.08165 0.0 5.21968   High
cufflinks 0.250783 0.0 1.18731    
cufflinks 0.24914 0.0 1.60089    
cufflinks 0.424789 0.0 2.54973    
cufflinks 0.285325 0.0 1.31907 Low  
cufflinks 2.15245 0.0 7.97339   High
cufflinks 0.0949211 0.0 0.473277 Low Low
cufflinks 0.188515 0.0 0.923224 Low  
cufflinks 0.02     Low  
cufflinks 0.014     Low  
cufflinks 0.067     Low  
cufflinks 0.052     Low  
cufflinks 0.063     Low  
cufflinks 0.003     Low Low
cufflinks 0.092     Low  
cufflinks 0.007     Low Low
cufflinks 0.056     Low  
cufflinks 0.128       High
cufflinks 0.072     Low  
cufflinks 0.008     Low Low
cufflinks 0.087     Low  
cufflinks 0.147       High
cufflinks 0.006     Low Low
cufflinks 0.093     Low  
cufflinks 0.011     Low  

0 Strain