Gene : Glyma.19G106400 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1064
Name:  ? Glyma.19G106400 Secondary Identifier:  ? PAC:30511345
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G106400 0.5kb upstream 0.5kb upstream 1737 true Chr19: 35730040-35731776 Glycine max
Glyma.19G106400 0.5kb upstream 0.5kb upstream 500 false Chr19: 35731277-35731776 Glycine max
Glyma.19G106400 0.5kb downstream 0.5kb downstream 1737 true Chr19: 35729540-35731276 Glycine max
Glyma.19G106400 0.5kb downstream 0.5kb downstream 500 false Chr19: 35729540-35730039 Glycine max
Glyma.19G106400 1.0kb upstream 1.0kb upstream 2237 true Chr19: 35730040-35732276 Glycine max
Glyma.19G106400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35731277-35732276 Glycine max
Glyma.19G106400 1.0kb downstream 1.0kb downstream 2237 true Chr19: 35729040-35731276 Glycine max
Glyma.19G106400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35729040-35730039 Glycine max
Glyma.19G106400 2.0kb upstream 2.0kb upstream 3237 true Chr19: 35730040-35733276 Glycine max
Glyma.19G106400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35731277-35733276 Glycine max
Glyma.19G106400 2.0kb downstream 2.0kb downstream 3237 true Chr19: 35728040-35731276 Glycine max
Glyma.19G106400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35728040-35730039 Glycine max
Glyma.19G106400 5.0kb upstream 5.0kb upstream 6237 true Chr19: 35730040-35736276 Glycine max
Glyma.19G106400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35731277-35736276 Glycine max
Glyma.19G106400 5.0kb downstream 5.0kb downstream 6237 true Chr19: 35725040-35731276 Glycine max
Glyma.19G106400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35725040-35730039 Glycine max
Glyma.19G106400 10.0kb upstream 10.0kb upstream 11237 true Chr19: 35730040-35741276 Glycine max
Glyma.19G106400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35731277-35741276 Glycine max
Glyma.19G106400 10.0kb downstream 10.0kb downstream 11237 true Chr19: 35720040-35731276 Glycine max
Glyma.19G106400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35720040-35730039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296576 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0912207 0.0 0.371616 Low Low
cufflinks 3.4081 0.0 11.322    
cufflinks 0.89278 0.0 3.30267    
cufflinks 0.0980847 0.0 0.39797 Low Low
cufflinks 3.79079 0.0 12.4382    
cufflinks 18.0734 0.0 49.1205   High
cufflinks 0.963437 0.0 3.55452    
cufflinks 0.404819 0.0 1.55365    
cufflinks 0.88546 0.0 3.27964    
cufflinks 1.263        
cufflinks 4.211        
cufflinks 0.728        
cufflinks 4.112        
cufflinks 5.408       High
cufflinks 0.974        
cufflinks 0.351        
cufflinks 7.328     High High
cufflinks 0.163       Low
cufflinks 1.897        
cufflinks 0.042     Low Low
cufflinks 2.214        
cufflinks 0.094       Low
cufflinks 0.251        
cufflinks 1.234        
cufflinks 0.131       Low
cufflinks 5.101       High

0 Strain