Gene : Glyma.19G106500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33450:SF5 - EMB Genomic Order:  1065
Name:  ? Glyma.19G106500 Secondary Identifier:  ? PAC:30511437
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G106500 0.5kb upstream 0.5kb upstream 1892 true Chr19: 35750361-35752252 Glycine max
Glyma.19G106500 0.5kb upstream 0.5kb upstream 500 false Chr19: 35750361-35750860 Glycine max
Glyma.19G106500 0.5kb downstream 0.5kb downstream 1892 true Chr19: 35750861-35752752 Glycine max
Glyma.19G106500 0.5kb downstream 0.5kb downstream 500 false Chr19: 35752253-35752752 Glycine max
Glyma.19G106500 1.0kb upstream 1.0kb upstream 2392 true Chr19: 35749861-35752252 Glycine max
Glyma.19G106500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35749861-35750860 Glycine max
Glyma.19G106500 1.0kb downstream 1.0kb downstream 2392 true Chr19: 35750861-35753252 Glycine max
Glyma.19G106500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35752253-35753252 Glycine max
Glyma.19G106500 2.0kb upstream 2.0kb upstream 3392 true Chr19: 35748861-35752252 Glycine max
Glyma.19G106500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35748861-35750860 Glycine max
Glyma.19G106500 2.0kb downstream 2.0kb downstream 3392 true Chr19: 35750861-35754252 Glycine max
Glyma.19G106500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35752253-35754252 Glycine max
Glyma.19G106500 5.0kb upstream 5.0kb upstream 6392 true Chr19: 35745861-35752252 Glycine max
Glyma.19G106500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35745861-35750860 Glycine max
Glyma.19G106500 5.0kb downstream 5.0kb downstream 6392 true Chr19: 35750861-35757252 Glycine max
Glyma.19G106500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35752253-35757252 Glycine max
Glyma.19G106500 10.0kb upstream 10.0kb upstream 11392 true Chr19: 35740861-35752252 Glycine max
Glyma.19G106500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35740861-35750860 Glycine max
Glyma.19G106500 10.0kb downstream 10.0kb downstream 11392 true Chr19: 35750861-35762252 Glycine max
Glyma.19G106500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35752253-35762252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309088 5265 Fabidae View MSA
124062808 5270 Rosid View MSA
123743467 5271 Pentapetalae View MSA
122796420 5272 Eudicot View MSA
122046487 5273 Angiosperm View MSA
121310612 5274 Embryophyte View MSA
123348052 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.315645 0.0 1.20811   Low
cufflinks 2.43945 0.0 8.11084    
cufflinks 41.4802 0.0 112.686 High High
cufflinks 1.62894 0.0 5.65897    
cufflinks 6.49202 0.0 18.9354    
cufflinks 2.34268 0.0 7.84335    
cufflinks 2.19292 0.0 7.40922    
cufflinks 2.91738 0.0 9.44453    
cufflinks 4.48998 0.0 13.721    
cufflinks 3.283        
cufflinks 2.311        
cufflinks 33.937     High High
cufflinks 9.131     High High
cufflinks 10.979     High High
cufflinks 1.706        
cufflinks 1.166       Low
cufflinks 4.627        
cufflinks 14.412     High High
cufflinks 1.965        
cufflinks 1.617        
cufflinks 1.929        
cufflinks 1.739        
cufflinks 1.712        
cufflinks 2.683        
cufflinks 1.255       Low
cufflinks 4.843        

0 Strain