Gene : Glyma.19G107300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24095:SF178 - ACETATE--COA LIGASE ACS, CHLOROPLASTIC/GLYOXYSOMAL Genomic Order:  1073
Name:  ? Glyma.19G107300 Secondary Identifier:  ? PAC:30514062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY66-21 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G107300 0.5kb upstream 0.5kb upstream 9306 true Chr19: 35879455-35888760 Glycine max
Glyma.19G107300 0.5kb upstream 0.5kb upstream 500 false Chr19: 35879455-35879954 Glycine max
Glyma.19G107300 0.5kb downstream 0.5kb downstream 9306 true Chr19: 35879955-35889260 Glycine max
Glyma.19G107300 0.5kb downstream 0.5kb downstream 500 false Chr19: 35888761-35889260 Glycine max
Glyma.19G107300 1.0kb upstream 1.0kb upstream 9806 true Chr19: 35878955-35888760 Glycine max
Glyma.19G107300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35878955-35879954 Glycine max
Glyma.19G107300 1.0kb downstream 1.0kb downstream 9806 true Chr19: 35879955-35889760 Glycine max
Glyma.19G107300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35888761-35889760 Glycine max
Glyma.19G107300 2.0kb upstream 2.0kb upstream 10806 true Chr19: 35877955-35888760 Glycine max
Glyma.19G107300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35877955-35879954 Glycine max
Glyma.19G107300 2.0kb downstream 2.0kb downstream 10806 true Chr19: 35879955-35890760 Glycine max
Glyma.19G107300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35888761-35890760 Glycine max
Glyma.19G107300 5.0kb upstream 5.0kb upstream 13806 true Chr19: 35874955-35888760 Glycine max
Glyma.19G107300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35874955-35879954 Glycine max
Glyma.19G107300 5.0kb downstream 5.0kb downstream 13806 true Chr19: 35879955-35893760 Glycine max
Glyma.19G107300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35888761-35893760 Glycine max
Glyma.19G107300 10.0kb upstream 10.0kb upstream 18806 true Chr19: 35869955-35888760 Glycine max
Glyma.19G107300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35869955-35879954 Glycine max
Glyma.19G107300 10.0kb downstream 10.0kb downstream 18806 true Chr19: 35879955-35898760 Glycine max
Glyma.19G107300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35888761-35898760 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303292 5265 Fabidae View MSA
124065659 5270 Rosid View MSA
123746880 5271 Pentapetalae View MSA
122789146 5272 Eudicot View MSA
122041906 5273 Angiosperm View MSA
121351540 5274 Embryophyte View MSA
123424340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9893 0.0 87.5196 High  
cufflinks 19.5704 0.0 60.3139    
cufflinks 8.69079 0.0 26.1023   Low
cufflinks 22.8821 0.0 72.2003 High  
cufflinks 17.7853 0.0 62.2715    
cufflinks 11.5301 0.0 34.2202   Low
cufflinks 19.5687 0.0 69.3416    
cufflinks 22.8173 0.0 82.6042 High  
cufflinks 15.677 0.0 47.235    
cufflinks 5.753       High
cufflinks 2.39        
cufflinks 2.7        
cufflinks 3.35        
cufflinks 3.803        
cufflinks 4.665       High
cufflinks 3.444        
cufflinks 1.345       Low
cufflinks 4.053        
cufflinks 4.248        
cufflinks 3.251        
cufflinks 2.59        
cufflinks 3.285        
cufflinks 3.122        
cufflinks 1.302       Low
cufflinks 3.254        
cufflinks 1.532       Low

0 Strain