Gene : Glyma.03G122400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24006:SF520 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  1224
Name:  ? Glyma.03G122400 Secondary Identifier:  ? PAC:30519350
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G122400 0.5kb upstream 0.5kb upstream 11386 true Chr03: 33531218-33542603 Glycine max
Glyma.03G122400 0.5kb upstream 0.5kb upstream 500 false Chr03: 33542104-33542603 Glycine max
Glyma.03G122400 0.5kb downstream 0.5kb downstream 11386 true Chr03: 33530718-33542103 Glycine max
Glyma.03G122400 0.5kb downstream 0.5kb downstream 500 false Chr03: 33530718-33531217 Glycine max
Glyma.03G122400 1.0kb upstream 1.0kb upstream 11886 true Chr03: 33531218-33543103 Glycine max
Glyma.03G122400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33542104-33543103 Glycine max
Glyma.03G122400 1.0kb downstream 1.0kb downstream 11886 true Chr03: 33530218-33542103 Glycine max
Glyma.03G122400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33530218-33531217 Glycine max
Glyma.03G122400 2.0kb upstream 2.0kb upstream 12886 true Chr03: 33531218-33544103 Glycine max
Glyma.03G122400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33542104-33544103 Glycine max
Glyma.03G122400 2.0kb downstream 2.0kb downstream 12886 true Chr03: 33529218-33542103 Glycine max
Glyma.03G122400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33529218-33531217 Glycine max
Glyma.03G122400 5.0kb upstream 5.0kb upstream 15886 true Chr03: 33531218-33547103 Glycine max
Glyma.03G122400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33542104-33547103 Glycine max
Glyma.03G122400 5.0kb downstream 5.0kb downstream 15886 true Chr03: 33526218-33542103 Glycine max
Glyma.03G122400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33526218-33531217 Glycine max
Glyma.03G122400 10.0kb upstream 10.0kb upstream 20886 true Chr03: 33531218-33552103 Glycine max
Glyma.03G122400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33542104-33552103 Glycine max
Glyma.03G122400 10.0kb downstream 10.0kb downstream 20886 true Chr03: 33521218-33542103 Glycine max
Glyma.03G122400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33521218-33531217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302403 5265 Fabidae View MSA
124064988 5270 Rosid View MSA
123740108 5271 Pentapetalae View MSA
122790123 5272 Eudicot View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.15287 0.0 18.4617    
cufflinks 8.33254 0.0 28.6156    
cufflinks 7.00023 0.0 24.2754    
cufflinks 7.03586 0.0 24.3032    
cufflinks 5.23941 0.0 18.8442    
cufflinks 3.29926 0.0 12.8606   Low
cufflinks 14.861 0.0 52.0388   High
cufflinks 5.14507 0.0 18.5135    
cufflinks 6.67103 0.0 23.1327    
cufflinks 0.757        
cufflinks 0.538       Low
cufflinks 1.764       High
cufflinks 0.951        
cufflinks 1.175        
cufflinks 0.759        
cufflinks 1.139        
cufflinks 0.423       Low
cufflinks 1.758       High
cufflinks 1.725       High
cufflinks 1.295        
cufflinks 0.504       Low
cufflinks 1.321        
cufflinks 1.488        
cufflinks 0.617        
cufflinks 1.232        
cufflinks 0.416       Low

0 Strain