Gene : Glyma.03G123000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654//PTHR11654:SF92 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  1230
Name:  ? Glyma.03G123000 Secondary Identifier:  ? PAC:30519167
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G123000 0.5kb upstream 0.5kb upstream 7290 true Chr03: 33577235-33584524 Glycine max
Glyma.03G123000 0.5kb upstream 0.5kb upstream 500 false Chr03: 33584025-33584524 Glycine max
Glyma.03G123000 0.5kb downstream 0.5kb downstream 7290 true Chr03: 33576735-33584024 Glycine max
Glyma.03G123000 0.5kb downstream 0.5kb downstream 500 false Chr03: 33576735-33577234 Glycine max
Glyma.03G123000 1.0kb upstream 1.0kb upstream 7790 true Chr03: 33577235-33585024 Glycine max
Glyma.03G123000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33584025-33585024 Glycine max
Glyma.03G123000 1.0kb downstream 1.0kb downstream 7790 true Chr03: 33576235-33584024 Glycine max
Glyma.03G123000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33576235-33577234 Glycine max
Glyma.03G123000 2.0kb upstream 2.0kb upstream 8790 true Chr03: 33577235-33586024 Glycine max
Glyma.03G123000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33584025-33586024 Glycine max
Glyma.03G123000 2.0kb downstream 2.0kb downstream 8790 true Chr03: 33575235-33584024 Glycine max
Glyma.03G123000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33575235-33577234 Glycine max
Glyma.03G123000 5.0kb upstream 5.0kb upstream 11790 true Chr03: 33577235-33589024 Glycine max
Glyma.03G123000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33584025-33589024 Glycine max
Glyma.03G123000 5.0kb downstream 5.0kb downstream 11790 true Chr03: 33572235-33584024 Glycine max
Glyma.03G123000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33572235-33577234 Glycine max
Glyma.03G123000 10.0kb upstream 10.0kb upstream 16790 true Chr03: 33577235-33594024 Glycine max
Glyma.03G123000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33584025-33594024 Glycine max
Glyma.03G123000 10.0kb downstream 10.0kb downstream 16790 true Chr03: 33567235-33584024 Glycine max
Glyma.03G123000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33567235-33577234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315776 5265 Fabidae View MSA
124040579 5270 Rosid View MSA
123611903 5271 Pentapetalae View MSA
122798246 5272 Eudicot View MSA
122051976 5273 Angiosperm View MSA
121351267 5274 Embryophyte View MSA
123382085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0112731 0.0 0.050983 Low Low
cufflinks 0.700719 0.0 2.52631    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.248153 0.0 0.943164    
cufflinks 5.47919 0.0 15.5195    
cufflinks 1.35244 0.0 4.61211    
cufflinks 2.77355 0.0 8.59325    
cufflinks 0.0327118 0.0 0.135467 Low Low
cufflinks 7.70539 0.0 21.137   High
cufflinks 0.002     Low Low
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.267       High
cufflinks 2.81       High
cufflinks 0.219        
cufflinks 0.017     Low  
cufflinks 1.857       High
cufflinks 0.021     Low  
cufflinks 0.109        
cufflinks 0.016     Low  
cufflinks 0.081        
cufflinks 0.013     Low  
cufflinks 0.008     Low Low
cufflinks 0.105        
cufflinks 0.009     Low  
cufflinks 0.204        

0 Strain