Gene : Glyma.03G131700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23201//PTHR23201:SF8 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  1317
Name:  ? Glyma.03G131700 Secondary Identifier:  ? PAC:30517393
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G131700 0.5kb upstream 0.5kb upstream 2747 true Chr03: 34663816-34666562 Glycine max
Glyma.03G131700 0.5kb upstream 0.5kb upstream 500 false Chr03: 34666063-34666562 Glycine max
Glyma.03G131700 0.5kb downstream 0.5kb downstream 2747 true Chr03: 34663316-34666062 Glycine max
Glyma.03G131700 0.5kb downstream 0.5kb downstream 500 false Chr03: 34663316-34663815 Glycine max
Glyma.03G131700 1.0kb upstream 1.0kb upstream 3247 true Chr03: 34663816-34667062 Glycine max
Glyma.03G131700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34666063-34667062 Glycine max
Glyma.03G131700 1.0kb downstream 1.0kb downstream 3247 true Chr03: 34662816-34666062 Glycine max
Glyma.03G131700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34662816-34663815 Glycine max
Glyma.03G131700 2.0kb upstream 2.0kb upstream 4247 true Chr03: 34663816-34668062 Glycine max
Glyma.03G131700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34666063-34668062 Glycine max
Glyma.03G131700 2.0kb downstream 2.0kb downstream 4247 true Chr03: 34661816-34666062 Glycine max
Glyma.03G131700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34661816-34663815 Glycine max
Glyma.03G131700 5.0kb upstream 5.0kb upstream 7247 true Chr03: 34663816-34671062 Glycine max
Glyma.03G131700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34666063-34671062 Glycine max
Glyma.03G131700 5.0kb downstream 5.0kb downstream 7247 true Chr03: 34658816-34666062 Glycine max
Glyma.03G131700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34658816-34663815 Glycine max
Glyma.03G131700 10.0kb upstream 10.0kb upstream 12247 true Chr03: 34663816-34676062 Glycine max
Glyma.03G131700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34666063-34676062 Glycine max
Glyma.03G131700 10.0kb downstream 10.0kb downstream 12247 true Chr03: 34653816-34666062 Glycine max
Glyma.03G131700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34653816-34663815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304512 5265 Fabidae View MSA
124069582 5270 Rosid View MSA
123752288 5271 Pentapetalae View MSA
122795520 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.89331 0.0 11.4175    
cufflinks 11.7617 0.0 49.4172    
cufflinks 7.45224 0.0 35.4934    
cufflinks 62.4274 0.0 244.056 High High
cufflinks 0.913813 0.0 4.47503    
cufflinks 2.39298 0.0 10.2105    
cufflinks 29.8128 0.0 103.267 High High
cufflinks 0.246514 0.0 0.970177   Low
cufflinks 6.44436 0.0 26.3526    
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.724        
cufflinks 0.003     Low Low
cufflinks 0.01     Low Low
cufflinks 0.243        
cufflinks 8.845     High  
cufflinks 0.037     Low  
cufflinks 17.18     High High
cufflinks 2.17        
cufflinks 12.326     High High
cufflinks 0.007     Low Low
cufflinks 9.424     High  
cufflinks 15.987     High High
cufflinks 0.003     Low Low
cufflinks 11.303     High High
cufflinks 0.023     Low  

0 Strain