Gene : Glyma.03G130300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12725//PTHR12725:SF60 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  1303
Name:  ? Glyma.03G130300 Secondary Identifier:  ? PAC:30518029
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G130300 0.5kb upstream 0.5kb upstream 5003 true Chr03: 34513636-34518638 Glycine max
Glyma.03G130300 0.5kb upstream 0.5kb upstream 500 false Chr03: 34513636-34514135 Glycine max
Glyma.03G130300 0.5kb downstream 0.5kb downstream 5003 true Chr03: 34514136-34519138 Glycine max
Glyma.03G130300 0.5kb downstream 0.5kb downstream 500 false Chr03: 34518639-34519138 Glycine max
Glyma.03G130300 1.0kb upstream 1.0kb upstream 5503 true Chr03: 34513136-34518638 Glycine max
Glyma.03G130300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34513136-34514135 Glycine max
Glyma.03G130300 1.0kb downstream 1.0kb downstream 5503 true Chr03: 34514136-34519638 Glycine max
Glyma.03G130300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34518639-34519638 Glycine max
Glyma.03G130300 2.0kb upstream 2.0kb upstream 6503 true Chr03: 34512136-34518638 Glycine max
Glyma.03G130300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34512136-34514135 Glycine max
Glyma.03G130300 2.0kb downstream 2.0kb downstream 6503 true Chr03: 34514136-34520638 Glycine max
Glyma.03G130300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34518639-34520638 Glycine max
Glyma.03G130300 5.0kb upstream 5.0kb upstream 9503 true Chr03: 34509136-34518638 Glycine max
Glyma.03G130300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34509136-34514135 Glycine max
Glyma.03G130300 5.0kb downstream 5.0kb downstream 9503 true Chr03: 34514136-34523638 Glycine max
Glyma.03G130300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34518639-34523638 Glycine max
Glyma.03G130300 10.0kb upstream 10.0kb upstream 14503 true Chr03: 34504136-34518638 Glycine max
Glyma.03G130300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34504136-34514135 Glycine max
Glyma.03G130300 10.0kb downstream 10.0kb downstream 14503 true Chr03: 34514136-34528638 Glycine max
Glyma.03G130300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34518639-34528638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310976 5265 Fabidae View MSA
124061048 5270 Rosid View MSA
123744964 5271 Pentapetalae View MSA
122797057 5272 Eudicot View MSA
122042471 5273 Angiosperm View MSA
121309972 5274 Embryophyte View MSA
123428341 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.519 0.0 117.627 High High
cufflinks 9.97093 0.0 27.9461    
cufflinks 6.69344 0.0 19.6512    
cufflinks 16.4028 0.0 44.2898    
cufflinks 6.352 0.0 18.7224    
cufflinks 3.22638 0.0 10.4747   Low
cufflinks 13.2176 0.0 36.138    
cufflinks 10.953 0.0 30.4213    
cufflinks 8.22519 0.0 23.5012    
cufflinks 1.319        
cufflinks 0.5       Low
cufflinks 1.983        
cufflinks 1.201        
cufflinks 0.816        
cufflinks 0.7        
cufflinks 4.401       High
cufflinks 0.515       Low
cufflinks 1.797        
cufflinks 3.884       High
cufflinks 1.702        
cufflinks 0.326       Low
cufflinks 4.012       High
cufflinks 3.54       High
cufflinks 0.708        
cufflinks 4.856       High
cufflinks 0.74        

0 Strain