Gene : Glyma.03G129400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  1294
Name:  ? Glyma.03G129400 Secondary Identifier:  ? PAC:30519204
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G129400 0.5kb upstream 0.5kb upstream 3970 true Chr03: 34398486-34402455 Glycine max
Glyma.03G129400 0.5kb upstream 0.5kb upstream 500 false Chr03: 34398486-34398985 Glycine max
Glyma.03G129400 0.5kb downstream 0.5kb downstream 3970 true Chr03: 34398986-34402955 Glycine max
Glyma.03G129400 0.5kb downstream 0.5kb downstream 500 false Chr03: 34402456-34402955 Glycine max
Glyma.03G129400 1.0kb upstream 1.0kb upstream 4470 true Chr03: 34397986-34402455 Glycine max
Glyma.03G129400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34397986-34398985 Glycine max
Glyma.03G129400 1.0kb downstream 1.0kb downstream 4470 true Chr03: 34398986-34403455 Glycine max
Glyma.03G129400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34402456-34403455 Glycine max
Glyma.03G129400 2.0kb upstream 2.0kb upstream 5470 true Chr03: 34396986-34402455 Glycine max
Glyma.03G129400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34396986-34398985 Glycine max
Glyma.03G129400 2.0kb downstream 2.0kb downstream 5470 true Chr03: 34398986-34404455 Glycine max
Glyma.03G129400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34402456-34404455 Glycine max
Glyma.03G129400 5.0kb upstream 5.0kb upstream 8470 true Chr03: 34393986-34402455 Glycine max
Glyma.03G129400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34393986-34398985 Glycine max
Glyma.03G129400 5.0kb downstream 5.0kb downstream 8470 true Chr03: 34398986-34407455 Glycine max
Glyma.03G129400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34402456-34407455 Glycine max
Glyma.03G129400 10.0kb upstream 10.0kb upstream 13470 true Chr03: 34388986-34402455 Glycine max
Glyma.03G129400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34388986-34398985 Glycine max
Glyma.03G129400 10.0kb downstream 10.0kb downstream 13470 true Chr03: 34398986-34412455 Glycine max
Glyma.03G129400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34402456-34412455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301583 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.772318 0.0 2.90601   Low
cufflinks 4.79878 0.0 15.652    
cufflinks 2.5687 0.0 8.96896    
cufflinks 5.00048 0.0 16.1806    
cufflinks 7.20257 0.0 22.1164    
cufflinks 11.394 0.0 32.9183   High
cufflinks 2.48412 0.0 8.71942    
cufflinks 4.91458 0.0 15.9418    
cufflinks 7.1065 0.0 21.868    
cufflinks 0.882        
cufflinks 0.308       Low
cufflinks 0.598        
cufflinks 1.723       High
cufflinks 1.76       High
cufflinks 0.458        
cufflinks 0.386        
cufflinks 0.556        
cufflinks 0.994       High
cufflinks 0.849        
cufflinks 0.319        
cufflinks 0.349        
cufflinks 0.341        
cufflinks 0.35        
cufflinks 0.404        
cufflinks 0.349        
cufflinks 0.521        

0 Strain