Gene : Glyma.19G099200 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  992
Name:  ? Glyma.19G099200 Secondary Identifier:  ? PAC:30513075
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G099200 0.5kb upstream 0.5kb upstream 2505 true Chr19: 34573567-34576071 Glycine max
Glyma.19G099200 0.5kb upstream 0.5kb upstream 500 false Chr19: 34573567-34574066 Glycine max
Glyma.19G099200 0.5kb downstream 0.5kb downstream 2505 true Chr19: 34574067-34576571 Glycine max
Glyma.19G099200 0.5kb downstream 0.5kb downstream 500 false Chr19: 34576072-34576571 Glycine max
Glyma.19G099200 1.0kb upstream 1.0kb upstream 3005 true Chr19: 34573067-34576071 Glycine max
Glyma.19G099200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 34573067-34574066 Glycine max
Glyma.19G099200 1.0kb downstream 1.0kb downstream 3005 true Chr19: 34574067-34577071 Glycine max
Glyma.19G099200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 34576072-34577071 Glycine max
Glyma.19G099200 2.0kb upstream 2.0kb upstream 4005 true Chr19: 34572067-34576071 Glycine max
Glyma.19G099200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 34572067-34574066 Glycine max
Glyma.19G099200 2.0kb downstream 2.0kb downstream 4005 true Chr19: 34574067-34578071 Glycine max
Glyma.19G099200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 34576072-34578071 Glycine max
Glyma.19G099200 5.0kb upstream 5.0kb upstream 7005 true Chr19: 34569067-34576071 Glycine max
Glyma.19G099200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 34569067-34574066 Glycine max
Glyma.19G099200 5.0kb downstream 5.0kb downstream 7005 true Chr19: 34574067-34581071 Glycine max
Glyma.19G099200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 34576072-34581071 Glycine max
Glyma.19G099200 10.0kb upstream 10.0kb upstream 12005 true Chr19: 34564067-34576071 Glycine max
Glyma.19G099200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 34564067-34574066 Glycine max
Glyma.19G099200 10.0kb downstream 10.0kb downstream 12005 true Chr19: 34574067-34586071 Glycine max
Glyma.19G099200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 34576072-34586071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308362 5265 Fabidae View MSA
124062168 5270 Rosid View MSA
123736487 5271 Pentapetalae View MSA
122788390 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.16068 0.0 12.3219   High
cufflinks 2.30197 0.0 7.45201    
cufflinks 1.99041 0.0 6.59667    
cufflinks 2.09536 0.0 6.85914    
cufflinks 1.28852 0.0 4.42741    
cufflinks 1.2424 0.0 4.30211    
cufflinks 1.20234 0.0 4.16394   Low
cufflinks 1.64324 0.0 5.53895    
cufflinks 1.64353 0.0 5.52051    
cufflinks 0.775        
cufflinks 0.753        
cufflinks 1.598        
cufflinks 0.818        
cufflinks 0.953        
cufflinks 0.867        
cufflinks 1.621        
cufflinks 0.707       Low
cufflinks 1.512        
cufflinks 1.853        
cufflinks 2.35       High
cufflinks 0.673       Low
cufflinks 2.419       High
cufflinks 1.875        
cufflinks 0.631       Low
cufflinks 2.169       High
cufflinks 0.796        

0 Strain