Gene : Glyma.03G134700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31879:SF2 - DET1- AND DDB1-ASSOCIATED PROTEIN 1 Genomic Order:  1347
Name:  ? Glyma.03G134700 Secondary Identifier:  ? PAC:30518924
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G134700 0.5kb upstream 0.5kb upstream 4165 true Chr03: 34999541-35003705 Glycine max
Glyma.03G134700 0.5kb upstream 0.5kb upstream 500 false Chr03: 34999541-35000040 Glycine max
Glyma.03G134700 0.5kb downstream 0.5kb downstream 4165 true Chr03: 35000041-35004205 Glycine max
Glyma.03G134700 0.5kb downstream 0.5kb downstream 500 false Chr03: 35003706-35004205 Glycine max
Glyma.03G134700 1.0kb upstream 1.0kb upstream 4665 true Chr03: 34999041-35003705 Glycine max
Glyma.03G134700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34999041-35000040 Glycine max
Glyma.03G134700 1.0kb downstream 1.0kb downstream 4665 true Chr03: 35000041-35004705 Glycine max
Glyma.03G134700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35003706-35004705 Glycine max
Glyma.03G134700 2.0kb upstream 2.0kb upstream 5665 true Chr03: 34998041-35003705 Glycine max
Glyma.03G134700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34998041-35000040 Glycine max
Glyma.03G134700 2.0kb downstream 2.0kb downstream 5665 true Chr03: 35000041-35005705 Glycine max
Glyma.03G134700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35003706-35005705 Glycine max
Glyma.03G134700 5.0kb upstream 5.0kb upstream 8665 true Chr03: 34995041-35003705 Glycine max
Glyma.03G134700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34995041-35000040 Glycine max
Glyma.03G134700 5.0kb downstream 5.0kb downstream 8665 true Chr03: 35000041-35008705 Glycine max
Glyma.03G134700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35003706-35008705 Glycine max
Glyma.03G134700 10.0kb upstream 10.0kb upstream 13665 true Chr03: 34990041-35003705 Glycine max
Glyma.03G134700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34990041-35000040 Glycine max
Glyma.03G134700 10.0kb downstream 10.0kb downstream 13665 true Chr03: 35000041-35013705 Glycine max
Glyma.03G134700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35003706-35013705 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309199 5265 Fabidae View MSA
124063668 5270 Rosid View MSA
123750714 5271 Pentapetalae View MSA
122790352 5272 Eudicot View MSA
122042926 5273 Angiosperm View MSA
121310044 5274 Embryophyte View MSA
123347643 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.88165 0.0 18.1569   Low
cufflinks 13.4515 0.0 50.2528    
cufflinks 10.12 0.0 40.7134    
cufflinks 13.0649 0.0 49.2039    
cufflinks 15.4119 0.0 63.9307    
cufflinks 27.7524 0.0 107.955 High High
cufflinks 22.6696 0.0 79.1294 High  
cufflinks 12.0654 0.0 46.0553    
cufflinks 18.5016 0.0 65.4535    
cufflinks 1.31        
cufflinks 2.272       High
cufflinks 1.125        
cufflinks 1.878        
cufflinks 1.564        
cufflinks 1.585        
cufflinks 0.547       Low
cufflinks 0.914        
cufflinks 1.413        
cufflinks 1.065        
cufflinks 0.505       Low
cufflinks 1.889        
cufflinks 0.528       Low
cufflinks 0.565       Low
cufflinks 2.36       High
cufflinks 0.531       Low
cufflinks 1.644        

0 Strain