Gene : Glyma.03G144400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1444
Name:  ? Glyma.03G144400 Secondary Identifier:  ? PAC:30517272
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G144400 0.5kb upstream 0.5kb upstream 1749 true Chr03: 36004707-36006455 Glycine max
Glyma.03G144400 0.5kb upstream 0.5kb upstream 500 false Chr03: 36005956-36006455 Glycine max
Glyma.03G144400 0.5kb downstream 0.5kb downstream 1749 true Chr03: 36004207-36005955 Glycine max
Glyma.03G144400 0.5kb downstream 0.5kb downstream 500 false Chr03: 36004207-36004706 Glycine max
Glyma.03G144400 1.0kb upstream 1.0kb upstream 2249 true Chr03: 36004707-36006955 Glycine max
Glyma.03G144400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36005956-36006955 Glycine max
Glyma.03G144400 1.0kb downstream 1.0kb downstream 2249 true Chr03: 36003707-36005955 Glycine max
Glyma.03G144400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36003707-36004706 Glycine max
Glyma.03G144400 2.0kb upstream 2.0kb upstream 3249 true Chr03: 36004707-36007955 Glycine max
Glyma.03G144400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36005956-36007955 Glycine max
Glyma.03G144400 2.0kb downstream 2.0kb downstream 3249 true Chr03: 36002707-36005955 Glycine max
Glyma.03G144400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36002707-36004706 Glycine max
Glyma.03G144400 5.0kb upstream 5.0kb upstream 6249 true Chr03: 36004707-36010955 Glycine max
Glyma.03G144400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36005956-36010955 Glycine max
Glyma.03G144400 5.0kb downstream 5.0kb downstream 6249 true Chr03: 35999707-36005955 Glycine max
Glyma.03G144400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35999707-36004706 Glycine max
Glyma.03G144400 10.0kb upstream 10.0kb upstream 11249 true Chr03: 36004707-36015955 Glycine max
Glyma.03G144400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36005956-36015955 Glycine max
Glyma.03G144400 10.0kb downstream 10.0kb downstream 11249 true Chr03: 35994707-36005955 Glycine max
Glyma.03G144400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35994707-36004706 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300333 5265 Fabidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0524889 0.0 0.224197 Low Low
cufflinks 5.73105 0.0 18.0873    
cufflinks 1.31512 0.0 4.79918    
cufflinks 12.2838 0.0 34.6903    
cufflinks 17.7916 0.0 48.7559    
cufflinks 43.5788 0.0 116.479 High High
cufflinks 0.257268 0.0 1.01136    
cufflinks 0.0774382 0.0 0.32055 Low Low
cufflinks 2.41        
cufflinks 1.174        
cufflinks 6.175       High
cufflinks 0.912        
cufflinks 0.662        
cufflinks 0.106        
cufflinks 0.028     Low Low
cufflinks 2.942       High
cufflinks 0.46        
cufflinks 0.197        
cufflinks 0.041     Low Low
cufflinks 1.694        
cufflinks 0.06     Low Low
cufflinks 0.46        
cufflinks 1.328        
cufflinks 0.105        
cufflinks 2.172        

0 Strain