Gene : Glyma.03G143100 G. max Wm82.a2.v1
Defline:  (1 of 46) PF03110 - SBP domain (SBP) Genomic Order:  1431
Name:  ? Glyma.03G143100 Secondary Identifier:  ? PAC:30519362
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G143100 0.5kb upstream 0.5kb upstream 4977 true Chr03: 35883600-35888576 Glycine max
Glyma.03G143100 0.5kb upstream 0.5kb upstream 500 false Chr03: 35888077-35888576 Glycine max
Glyma.03G143100 0.5kb downstream 0.5kb downstream 4977 true Chr03: 35883100-35888076 Glycine max
Glyma.03G143100 0.5kb downstream 0.5kb downstream 500 false Chr03: 35883100-35883599 Glycine max
Glyma.03G143100 1.0kb upstream 1.0kb upstream 5477 true Chr03: 35883600-35889076 Glycine max
Glyma.03G143100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35888077-35889076 Glycine max
Glyma.03G143100 1.0kb downstream 1.0kb downstream 5477 true Chr03: 35882600-35888076 Glycine max
Glyma.03G143100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35882600-35883599 Glycine max
Glyma.03G143100 2.0kb upstream 2.0kb upstream 6477 true Chr03: 35883600-35890076 Glycine max
Glyma.03G143100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35888077-35890076 Glycine max
Glyma.03G143100 2.0kb downstream 2.0kb downstream 6477 true Chr03: 35881600-35888076 Glycine max
Glyma.03G143100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35881600-35883599 Glycine max
Glyma.03G143100 5.0kb upstream 5.0kb upstream 9477 true Chr03: 35883600-35893076 Glycine max
Glyma.03G143100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35888077-35893076 Glycine max
Glyma.03G143100 5.0kb downstream 5.0kb downstream 9477 true Chr03: 35878600-35888076 Glycine max
Glyma.03G143100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35878600-35883599 Glycine max
Glyma.03G143100 10.0kb upstream 10.0kb upstream 14477 true Chr03: 35883600-35898076 Glycine max
Glyma.03G143100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35888077-35898076 Glycine max
Glyma.03G143100 10.0kb downstream 10.0kb downstream 14477 true Chr03: 35873600-35888076 Glycine max
Glyma.03G143100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35873600-35883599 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308420 5265 Fabidae View MSA
124062947 5270 Rosid View MSA
123736382 5271 Pentapetalae View MSA
122786018 5272 Eudicot View MSA
122041751 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309885 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.89712 0.0 11.7182    
cufflinks 8.49889 0.0 23.3792   High
cufflinks 5.13638 0.0 14.8839    
cufflinks 7.1748 0.0 20.0196   High
cufflinks 1.58959 0.0 5.3946    
cufflinks 0.86163 0.0 3.0847   Low
cufflinks 0.780424 0.0 2.81631   Low
cufflinks 3.64078 0.0 11.016    
cufflinks 0.724244 0.0 2.62297   Low
cufflinks 2.145        
cufflinks 0.102       Low
cufflinks 3.842       High
cufflinks 1.32        
cufflinks 0.82        
cufflinks 0.025     Low Low
cufflinks 1.511        
cufflinks 0.25        
cufflinks 1.747        
cufflinks 9.6     High High
cufflinks 1.486        
cufflinks 0.131       Low
cufflinks 2.205        
cufflinks 4.403       High
cufflinks 0.138       Low
cufflinks 1.174        
cufflinks 0.341        

0 Strain