Gene : Glyma.03G142200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Genomic Order:  1422
Name:  ? Glyma.03G142200 Secondary Identifier:  ? PAC:30518243
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G142200 0.5kb upstream 0.5kb upstream 2100 true Chr03: 35800433-35802532 Glycine max
Glyma.03G142200 0.5kb upstream 0.5kb upstream 500 false Chr03: 35800433-35800932 Glycine max
Glyma.03G142200 0.5kb downstream 0.5kb downstream 2100 true Chr03: 35800933-35803032 Glycine max
Glyma.03G142200 0.5kb downstream 0.5kb downstream 500 false Chr03: 35802533-35803032 Glycine max
Glyma.03G142200 1.0kb upstream 1.0kb upstream 2600 true Chr03: 35799933-35802532 Glycine max
Glyma.03G142200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35799933-35800932 Glycine max
Glyma.03G142200 1.0kb downstream 1.0kb downstream 2600 true Chr03: 35800933-35803532 Glycine max
Glyma.03G142200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35802533-35803532 Glycine max
Glyma.03G142200 2.0kb upstream 2.0kb upstream 3600 true Chr03: 35798933-35802532 Glycine max
Glyma.03G142200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35798933-35800932 Glycine max
Glyma.03G142200 2.0kb downstream 2.0kb downstream 3600 true Chr03: 35800933-35804532 Glycine max
Glyma.03G142200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35802533-35804532 Glycine max
Glyma.03G142200 5.0kb upstream 5.0kb upstream 6600 true Chr03: 35795933-35802532 Glycine max
Glyma.03G142200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35795933-35800932 Glycine max
Glyma.03G142200 5.0kb downstream 5.0kb downstream 6600 true Chr03: 35800933-35807532 Glycine max
Glyma.03G142200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35802533-35807532 Glycine max
Glyma.03G142200 10.0kb upstream 10.0kb upstream 11600 true Chr03: 35790933-35802532 Glycine max
Glyma.03G142200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35790933-35800932 Glycine max
Glyma.03G142200 10.0kb downstream 10.0kb downstream 11600 true Chr03: 35800933-35812532 Glycine max
Glyma.03G142200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35802533-35812532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.954 0.0 234.245 High  
cufflinks 155.48 0.0 438.632 High  
cufflinks 53.4393 0.0 142.598 High Low
cufflinks 105.165 0.0 286.536 High  
cufflinks 232.926 0.0 694.583 High High
cufflinks 169.161 0.0 481.831 High  
cufflinks 288.019 0.0 889.861 High High
cufflinks 139.789 0.0 390.778 High  
cufflinks 132.929 0.0 369.463 High  
cufflinks 49.057     High  
cufflinks 17.451     High Low
cufflinks 26.676     High  
cufflinks 99.474     High High
cufflinks 149.89     High High
cufflinks 12.834     High Low
cufflinks 37.612     High  
cufflinks 22.623     High  
cufflinks 30.615     High  
cufflinks 50.322     High  
cufflinks 27.472     High  
cufflinks 24.313     High  
cufflinks 27.719     High  
cufflinks 40.255     High  
cufflinks 18.524     High  
cufflinks 36.487     High  
cufflinks 28.597     High  

0 Strain