Gene : Glyma.03G142300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Genomic Order:  1423
Name:  ? Glyma.03G142300 Secondary Identifier:  ? PAC:30518587
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G142300 0.5kb upstream 0.5kb upstream 2304 true Chr03: 35803794-35806097 Glycine max
Glyma.03G142300 0.5kb upstream 0.5kb upstream 500 false Chr03: 35803794-35804293 Glycine max
Glyma.03G142300 0.5kb downstream 0.5kb downstream 2304 true Chr03: 35804294-35806597 Glycine max
Glyma.03G142300 0.5kb downstream 0.5kb downstream 500 false Chr03: 35806098-35806597 Glycine max
Glyma.03G142300 1.0kb upstream 1.0kb upstream 2804 true Chr03: 35803294-35806097 Glycine max
Glyma.03G142300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35803294-35804293 Glycine max
Glyma.03G142300 1.0kb downstream 1.0kb downstream 2804 true Chr03: 35804294-35807097 Glycine max
Glyma.03G142300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35806098-35807097 Glycine max
Glyma.03G142300 2.0kb upstream 2.0kb upstream 3804 true Chr03: 35802294-35806097 Glycine max
Glyma.03G142300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35802294-35804293 Glycine max
Glyma.03G142300 2.0kb downstream 2.0kb downstream 3804 true Chr03: 35804294-35808097 Glycine max
Glyma.03G142300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35806098-35808097 Glycine max
Glyma.03G142300 5.0kb upstream 5.0kb upstream 6804 true Chr03: 35799294-35806097 Glycine max
Glyma.03G142300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35799294-35804293 Glycine max
Glyma.03G142300 5.0kb downstream 5.0kb downstream 6804 true Chr03: 35804294-35811097 Glycine max
Glyma.03G142300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35806098-35811097 Glycine max
Glyma.03G142300 10.0kb upstream 10.0kb upstream 11804 true Chr03: 35794294-35806097 Glycine max
Glyma.03G142300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35794294-35804293 Glycine max
Glyma.03G142300 10.0kb downstream 10.0kb downstream 11804 true Chr03: 35804294-35816097 Glycine max
Glyma.03G142300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35806098-35816097 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.0318 0.0 208.392 High  
cufflinks 139.322 0.0 396.846 High  
cufflinks 45.0019 0.0 120.063 High Low
cufflinks 64.8076 0.0 174.013 High Low
cufflinks 175.321 0.0 516.861 High  
cufflinks 169.44 0.0 495.874 High  
cufflinks 239.62 0.0 742.425 High High
cufflinks 109.848 0.0 305.61 High  
cufflinks 117.21 0.0 328.196 High  
cufflinks 30.99     High  
cufflinks 11.087     High Low
cufflinks 19.881     High  
cufflinks 76.831     High High
cufflinks 119.812     High High
cufflinks 8.625     High Low
cufflinks 24.728     High  
cufflinks 20.079     High  
cufflinks 21.423     High  
cufflinks 40.463     High  
cufflinks 13.931     High  
cufflinks 17.777     High  
cufflinks 16.229     High  
cufflinks 36.217     High  
cufflinks 11.27     High Low
cufflinks 22.806     High  
cufflinks 20.137     High  

0 Strain