Gene : Glyma.03G142500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10024:SF243 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1425
Name:  ? Glyma.03G142500 Secondary Identifier:  ? PAC:30516584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G142500 0.5kb upstream 0.5kb upstream 4302 true Chr03: 35835116-35839417 Glycine max
Glyma.03G142500 0.5kb upstream 0.5kb upstream 500 false Chr03: 35838918-35839417 Glycine max
Glyma.03G142500 0.5kb downstream 0.5kb downstream 4302 true Chr03: 35834616-35838917 Glycine max
Glyma.03G142500 0.5kb downstream 0.5kb downstream 500 false Chr03: 35834616-35835115 Glycine max
Glyma.03G142500 1.0kb upstream 1.0kb upstream 4802 true Chr03: 35835116-35839917 Glycine max
Glyma.03G142500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35838918-35839917 Glycine max
Glyma.03G142500 1.0kb downstream 1.0kb downstream 4802 true Chr03: 35834116-35838917 Glycine max
Glyma.03G142500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35834116-35835115 Glycine max
Glyma.03G142500 2.0kb upstream 2.0kb upstream 5802 true Chr03: 35835116-35840917 Glycine max
Glyma.03G142500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35838918-35840917 Glycine max
Glyma.03G142500 2.0kb downstream 2.0kb downstream 5802 true Chr03: 35833116-35838917 Glycine max
Glyma.03G142500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35833116-35835115 Glycine max
Glyma.03G142500 5.0kb upstream 5.0kb upstream 8802 true Chr03: 35835116-35843917 Glycine max
Glyma.03G142500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35838918-35843917 Glycine max
Glyma.03G142500 5.0kb downstream 5.0kb downstream 8802 true Chr03: 35830116-35838917 Glycine max
Glyma.03G142500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35830116-35835115 Glycine max
Glyma.03G142500 10.0kb upstream 10.0kb upstream 13802 true Chr03: 35835116-35848917 Glycine max
Glyma.03G142500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35838918-35848917 Glycine max
Glyma.03G142500 10.0kb downstream 10.0kb downstream 13802 true Chr03: 35825116-35838917 Glycine max
Glyma.03G142500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35825116-35835115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309147 5265 Fabidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.8837 0.0 10.7665   Low
cufflinks 28.9593 0.0 82.8331 High  
cufflinks 4.88152 0.0 13.2888   Low
cufflinks 22.8413 0.0 63.7175 High  
cufflinks 17.9773 0.0 49.0886    
cufflinks 8.39254 0.0 22.4012    
cufflinks 39.0285 0.0 116.548 High High
cufflinks 23.5189 0.0 65.8104 High  
cufflinks 13.895 0.0 37.3849    
cufflinks 26.458     High High
cufflinks 1.453       Low
cufflinks 12.495     High  
cufflinks 17.659     High  
cufflinks 21.923     High  
cufflinks 3.131       Low
cufflinks 15.03     High  
cufflinks 3.916        
cufflinks 25.007     High High
cufflinks 31.192     High High
cufflinks 10.392     High  
cufflinks 3.538        
cufflinks 12.076     High  
cufflinks 18.51     High  
cufflinks 1.777       Low
cufflinks 12.109     High  
cufflinks 3.592        

0 Strain