Gene : Glyma.03G141300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11652:SF19 - 30S RIBOSOMAL PROTEIN S12, CHLOROPLASTIC Genomic Order:  1413
Name:  ? Glyma.03G141300 Secondary Identifier:  ? PAC:30518769
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G141300 0.5kb upstream 0.5kb upstream 1932 true Chr03: 35729634-35731565 Glycine max
Glyma.03G141300 0.5kb upstream 0.5kb upstream 500 false Chr03: 35729634-35730133 Glycine max
Glyma.03G141300 0.5kb downstream 0.5kb downstream 1932 true Chr03: 35730134-35732065 Glycine max
Glyma.03G141300 0.5kb downstream 0.5kb downstream 500 false Chr03: 35731566-35732065 Glycine max
Glyma.03G141300 1.0kb upstream 1.0kb upstream 2432 true Chr03: 35729134-35731565 Glycine max
Glyma.03G141300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35729134-35730133 Glycine max
Glyma.03G141300 1.0kb downstream 1.0kb downstream 2432 true Chr03: 35730134-35732565 Glycine max
Glyma.03G141300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35731566-35732565 Glycine max
Glyma.03G141300 2.0kb upstream 2.0kb upstream 3432 true Chr03: 35728134-35731565 Glycine max
Glyma.03G141300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35728134-35730133 Glycine max
Glyma.03G141300 2.0kb downstream 2.0kb downstream 3432 true Chr03: 35730134-35733565 Glycine max
Glyma.03G141300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35731566-35733565 Glycine max
Glyma.03G141300 5.0kb upstream 5.0kb upstream 6432 true Chr03: 35725134-35731565 Glycine max
Glyma.03G141300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35725134-35730133 Glycine max
Glyma.03G141300 5.0kb downstream 5.0kb downstream 6432 true Chr03: 35730134-35736565 Glycine max
Glyma.03G141300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35731566-35736565 Glycine max
Glyma.03G141300 10.0kb upstream 10.0kb upstream 11432 true Chr03: 35720134-35731565 Glycine max
Glyma.03G141300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35720134-35730133 Glycine max
Glyma.03G141300 10.0kb downstream 10.0kb downstream 11432 true Chr03: 35730134-35741565 Glycine max
Glyma.03G141300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35731566-35741565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611888 5273 Angiosperm Singleton cluster - no MSA
122245196 5265 Fabidae Singleton cluster - no MSA
123989375 5270 Rosid Singleton cluster - no MSA
123564487 5271 Pentapetalae Singleton cluster - no MSA
122599257 5272 Eudicot Singleton cluster - no MSA
120884115 5274 Embryophyte Singleton cluster - no MSA
122924924 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.884159 0.0 29.6921   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.209223 0.0 13.4295    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.348133 0.0 20.9027    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.134        
cufflinks 0.175        
cufflinks 0.045     Low Low
cufflinks 0.114        
cufflinks 0.2        
cufflinks 0.159        
cufflinks 0.143        
cufflinks 0.14        
cufflinks 0.067     Low Low
cufflinks 0.166        
cufflinks 0.199        
cufflinks 0.171        
cufflinks 0.185        
cufflinks 0.283       High
cufflinks 0.12        
cufflinks 0.113        
cufflinks 0.04     Low Low

0 Strain