Gene : Glyma.03G145900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  1459
Name:  ? Glyma.03G145900 Secondary Identifier:  ? PAC:30519390
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G145900 0.5kb upstream 0.5kb upstream 3915 true Chr03: 36127816-36131730 Glycine max
Glyma.03G145900 0.5kb upstream 0.5kb upstream 500 false Chr03: 36131231-36131730 Glycine max
Glyma.03G145900 0.5kb downstream 0.5kb downstream 3915 true Chr03: 36127316-36131230 Glycine max
Glyma.03G145900 0.5kb downstream 0.5kb downstream 500 false Chr03: 36127316-36127815 Glycine max
Glyma.03G145900 1.0kb upstream 1.0kb upstream 4415 true Chr03: 36127816-36132230 Glycine max
Glyma.03G145900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36131231-36132230 Glycine max
Glyma.03G145900 1.0kb downstream 1.0kb downstream 4415 true Chr03: 36126816-36131230 Glycine max
Glyma.03G145900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36126816-36127815 Glycine max
Glyma.03G145900 2.0kb upstream 2.0kb upstream 5415 true Chr03: 36127816-36133230 Glycine max
Glyma.03G145900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36131231-36133230 Glycine max
Glyma.03G145900 2.0kb downstream 2.0kb downstream 5415 true Chr03: 36125816-36131230 Glycine max
Glyma.03G145900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36125816-36127815 Glycine max
Glyma.03G145900 5.0kb upstream 5.0kb upstream 8415 true Chr03: 36127816-36136230 Glycine max
Glyma.03G145900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36131231-36136230 Glycine max
Glyma.03G145900 5.0kb downstream 5.0kb downstream 8415 true Chr03: 36122816-36131230 Glycine max
Glyma.03G145900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36122816-36127815 Glycine max
Glyma.03G145900 10.0kb upstream 10.0kb upstream 13415 true Chr03: 36127816-36141230 Glycine max
Glyma.03G145900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36131231-36141230 Glycine max
Glyma.03G145900 10.0kb downstream 10.0kb downstream 13415 true Chr03: 36117816-36131230 Glycine max
Glyma.03G145900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36117816-36127815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303438 5265 Fabidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73456 0.0 20.8765    
cufflinks 9.97494 0.0 26.6739    
cufflinks 5.63772 0.0 15.4986    
cufflinks 21.6855 0.0 58.8674 High High
cufflinks 5.12406 0.0 14.2321    
cufflinks 2.83769 0.0 8.43636    
cufflinks 1.37541 0.0 4.53231   Low
cufflinks 6.05132 0.0 16.5464    
cufflinks 4.00875 0.0 11.395    
cufflinks 13.885     High High
cufflinks 1.406       Low
cufflinks 10.536     High  
cufflinks 8.66     High  
cufflinks 5.948        
cufflinks 1.195       Low
cufflinks 11.65     High  
cufflinks 3.971        
cufflinks 12.763     High  
cufflinks 10.392     High  
cufflinks 8.411     High  
cufflinks 1.726       Low
cufflinks 9.979     High  
cufflinks 14.719     High High
cufflinks 1.272       Low
cufflinks 8.244     High  
cufflinks 2.917        

0 Strain