Gene : Glyma.03G146000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10438:SF283 - THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC Genomic Order:  1460
Name:  ? Glyma.03G146000 Secondary Identifier:  ? PAC:30515895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G146000 0.5kb upstream 0.5kb upstream 3384 true Chr03: 36140885-36144268 Glycine max
Glyma.03G146000 0.5kb upstream 0.5kb upstream 500 false Chr03: 36140885-36141384 Glycine max
Glyma.03G146000 0.5kb downstream 0.5kb downstream 3384 true Chr03: 36141385-36144768 Glycine max
Glyma.03G146000 0.5kb downstream 0.5kb downstream 500 false Chr03: 36144269-36144768 Glycine max
Glyma.03G146000 1.0kb upstream 1.0kb upstream 3884 true Chr03: 36140385-36144268 Glycine max
Glyma.03G146000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36140385-36141384 Glycine max
Glyma.03G146000 1.0kb downstream 1.0kb downstream 3884 true Chr03: 36141385-36145268 Glycine max
Glyma.03G146000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36144269-36145268 Glycine max
Glyma.03G146000 2.0kb upstream 2.0kb upstream 4884 true Chr03: 36139385-36144268 Glycine max
Glyma.03G146000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36139385-36141384 Glycine max
Glyma.03G146000 2.0kb downstream 2.0kb downstream 4884 true Chr03: 36141385-36146268 Glycine max
Glyma.03G146000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36144269-36146268 Glycine max
Glyma.03G146000 5.0kb upstream 5.0kb upstream 7884 true Chr03: 36136385-36144268 Glycine max
Glyma.03G146000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36136385-36141384 Glycine max
Glyma.03G146000 5.0kb downstream 5.0kb downstream 7884 true Chr03: 36141385-36149268 Glycine max
Glyma.03G146000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36144269-36149268 Glycine max
Glyma.03G146000 10.0kb upstream 10.0kb upstream 12884 true Chr03: 36131385-36144268 Glycine max
Glyma.03G146000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36131385-36141384 Glycine max
Glyma.03G146000 10.0kb downstream 10.0kb downstream 12884 true Chr03: 36141385-36154268 Glycine max
Glyma.03G146000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36144269-36154268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300113 5265 Fabidae View MSA
124066341 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.1636 0.0 59.3927   High
cufflinks 8.9286 0.0 25.6052    
cufflinks 12.9457 0.0 35.6632   High
cufflinks 5.89748 0.0 17.8143    
cufflinks 1.6232 0.0 5.7539    
cufflinks 0.524671 0.0 1.98051   Low
cufflinks 2.11476 0.0 7.3411    
cufflinks 4.29875 0.0 13.5988    
cufflinks 2.36159 0.0 8.08441    
cufflinks 0.813        
cufflinks 2.846        
cufflinks 3.689        
cufflinks 0.15       Low
cufflinks 0.124       Low
cufflinks 1.778        
cufflinks 10.563     High High
cufflinks 0.411       Low
cufflinks 2.511        
cufflinks 2.555        
cufflinks 15.709     High High
cufflinks 2.27        
cufflinks 14.08     High High
cufflinks 8.064     High  
cufflinks 2.814        
cufflinks 13.439     High High
cufflinks 1.031        

0 Strain