Gene : Glyma.03G082100 G. max Wm82.a2.v1
Defline:  (1 of 5) PF01439 - Metallothionein (Metallothio_2) Genomic Order:  821
Name:  ? Glyma.03G082100 Secondary Identifier:  ? PAC:30517948
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G082100 0.5kb upstream 0.5kb upstream 1860 true Chr03: 22645527-22647386 Glycine max
Glyma.03G082100 0.5kb upstream 0.5kb upstream 500 false Chr03: 22645527-22646026 Glycine max
Glyma.03G082100 0.5kb downstream 0.5kb downstream 1860 true Chr03: 22646027-22647886 Glycine max
Glyma.03G082100 0.5kb downstream 0.5kb downstream 500 false Chr03: 22647387-22647886 Glycine max
Glyma.03G082100 1.0kb upstream 1.0kb upstream 2360 true Chr03: 22645027-22647386 Glycine max
Glyma.03G082100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22645027-22646026 Glycine max
Glyma.03G082100 1.0kb downstream 1.0kb downstream 2360 true Chr03: 22646027-22648386 Glycine max
Glyma.03G082100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22647387-22648386 Glycine max
Glyma.03G082100 2.0kb upstream 2.0kb upstream 3360 true Chr03: 22644027-22647386 Glycine max
Glyma.03G082100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22644027-22646026 Glycine max
Glyma.03G082100 2.0kb downstream 2.0kb downstream 3360 true Chr03: 22646027-22649386 Glycine max
Glyma.03G082100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22647387-22649386 Glycine max
Glyma.03G082100 5.0kb upstream 5.0kb upstream 6360 true Chr03: 22641027-22647386 Glycine max
Glyma.03G082100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22641027-22646026 Glycine max
Glyma.03G082100 5.0kb downstream 5.0kb downstream 6360 true Chr03: 22646027-22652386 Glycine max
Glyma.03G082100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22647387-22652386 Glycine max
Glyma.03G082100 10.0kb upstream 10.0kb upstream 11360 true Chr03: 22636027-22647386 Glycine max
Glyma.03G082100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22636027-22646026 Glycine max
Glyma.03G082100 10.0kb downstream 10.0kb downstream 11360 true Chr03: 22646027-22657386 Glycine max
Glyma.03G082100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22647387-22657386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310811 5265 Fabidae View MSA
124074088 5270 Rosid View MSA
123752973 5271 Pentapetalae View MSA
122795449 5272 Eudicot View MSA
122044110 5273 Angiosperm View MSA
121310239 5274 Embryophyte View MSA
123347784 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.9413 0.0 194.844 High  
cufflinks 8.70296 0.0 27.758   Low
cufflinks 2516.17 0.0 14671.6 High High
cufflinks 8.89878 0.0 28.2029   Low
cufflinks 88.0842 0.0 236.71 High  
cufflinks 2183.94 0.0 11969.7 High High
cufflinks 36.3816 0.0 98.4729 High  
cufflinks 79.2119 0.0 212.115 High  
cufflinks 91.926 0.0 247.274 High  
cufflinks 14.927     High  
cufflinks 9.023     High  
cufflinks 498.685     High High
cufflinks 27.384     High  
cufflinks 11.804     High  
cufflinks 8.514     High  
cufflinks 5.607        
cufflinks 16.841     High  
cufflinks 63.869     High High
cufflinks 3.191       Low
cufflinks 5.194        
cufflinks 20.345     High  
cufflinks 7.862     High  
cufflinks 4.895        
cufflinks 9.288     High  
cufflinks 5.394        
cufflinks 31.274     High  

0 Strain