Gene : Glyma.03G096400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31791:SF12 - FRIGIDA-LIKE PROTEIN 3 Genomic Order:  964
Name:  ? Glyma.03G096400 Secondary Identifier:  ? PAC:30516658
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G096400 0.5kb upstream 0.5kb upstream 6652 true Chr03: 28358615-28365266 Glycine max
Glyma.03G096400 0.5kb upstream 0.5kb upstream 500 false Chr03: 28358615-28359114 Glycine max
Glyma.03G096400 0.5kb downstream 0.5kb downstream 6652 true Chr03: 28359115-28365766 Glycine max
Glyma.03G096400 0.5kb downstream 0.5kb downstream 500 false Chr03: 28365267-28365766 Glycine max
Glyma.03G096400 1.0kb upstream 1.0kb upstream 7152 true Chr03: 28358115-28365266 Glycine max
Glyma.03G096400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28358115-28359114 Glycine max
Glyma.03G096400 1.0kb downstream 1.0kb downstream 7152 true Chr03: 28359115-28366266 Glycine max
Glyma.03G096400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28365267-28366266 Glycine max
Glyma.03G096400 2.0kb upstream 2.0kb upstream 8152 true Chr03: 28357115-28365266 Glycine max
Glyma.03G096400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28357115-28359114 Glycine max
Glyma.03G096400 2.0kb downstream 2.0kb downstream 8152 true Chr03: 28359115-28367266 Glycine max
Glyma.03G096400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28365267-28367266 Glycine max
Glyma.03G096400 5.0kb upstream 5.0kb upstream 11152 true Chr03: 28354115-28365266 Glycine max
Glyma.03G096400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28354115-28359114 Glycine max
Glyma.03G096400 5.0kb downstream 5.0kb downstream 11152 true Chr03: 28359115-28370266 Glycine max
Glyma.03G096400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28365267-28370266 Glycine max
Glyma.03G096400 10.0kb upstream 10.0kb upstream 16152 true Chr03: 28349115-28365266 Glycine max
Glyma.03G096400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28349115-28359114 Glycine max
Glyma.03G096400 10.0kb downstream 10.0kb downstream 16152 true Chr03: 28359115-28375266 Glycine max
Glyma.03G096400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28365267-28375266 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313413 5265 Fabidae View MSA
124068381 5270 Rosid View MSA
123736427 5271 Pentapetalae View MSA
122790355 5272 Eudicot View MSA
122047978 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.5567 0.0 169.912 High  
cufflinks 84.6704 0.0 419.972 High High
cufflinks 40.8652 0.0 180.364 High  
cufflinks 35.9402 0.0 150.017 High  
cufflinks 25.9197 0.0 100.606 High Low
cufflinks 28.512 0.0 100.31 High  
cufflinks 60.6096 0.0 260.385 High High
cufflinks 35.0774 0.0 146.479 High  
cufflinks 32.9983 0.0 134.381 High  
cufflinks 4.615        
cufflinks 3.676        
cufflinks 5.222        
cufflinks 2.743       Low
cufflinks 2.405       Low
cufflinks 3.54        
cufflinks 6.538        
cufflinks 3.032       Low
cufflinks 6.126        
cufflinks 10.038     High High
cufflinks 6.771        
cufflinks 3.151        
cufflinks 6.898        
cufflinks 7.897     High High
cufflinks 3.994        
cufflinks 6.207        
cufflinks 2.946       Low

0 Strain