Gene : Glyma.03G094400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10422 - CYTOCHROME C OXIDASE SUBUNIT 1 Genomic Order:  944
Name:  ? Glyma.03G094400 Secondary Identifier:  ? PAC:30515819
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G094400 0.5kb upstream 0.5kb upstream 764 true Chr03: 27905582-27906345 Glycine max
Glyma.03G094400 0.5kb upstream 0.5kb upstream 500 false Chr03: 27905582-27906081 Glycine max
Glyma.03G094400 0.5kb downstream 0.5kb downstream 764 true Chr03: 27906082-27906845 Glycine max
Glyma.03G094400 0.5kb downstream 0.5kb downstream 500 false Chr03: 27906346-27906845 Glycine max
Glyma.03G094400 1.0kb upstream 1.0kb upstream 1264 true Chr03: 27905082-27906345 Glycine max
Glyma.03G094400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27905082-27906081 Glycine max
Glyma.03G094400 1.0kb downstream 1.0kb downstream 1264 true Chr03: 27906082-27907345 Glycine max
Glyma.03G094400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27906346-27907345 Glycine max
Glyma.03G094400 2.0kb upstream 2.0kb upstream 2264 true Chr03: 27904082-27906345 Glycine max
Glyma.03G094400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27904082-27906081 Glycine max
Glyma.03G094400 2.0kb downstream 2.0kb downstream 2264 true Chr03: 27906082-27908345 Glycine max
Glyma.03G094400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27906346-27908345 Glycine max
Glyma.03G094400 5.0kb upstream 5.0kb upstream 5264 true Chr03: 27901082-27906345 Glycine max
Glyma.03G094400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27901082-27906081 Glycine max
Glyma.03G094400 5.0kb downstream 5.0kb downstream 5264 true Chr03: 27906082-27911345 Glycine max
Glyma.03G094400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27906346-27911345 Glycine max
Glyma.03G094400 10.0kb upstream 10.0kb upstream 10264 true Chr03: 27896082-27906345 Glycine max
Glyma.03G094400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27896082-27906081 Glycine max
Glyma.03G094400 10.0kb downstream 10.0kb downstream 10264 true Chr03: 27906082-27916345 Glycine max
Glyma.03G094400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27906346-27916345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779752 5273 Angiosperm View MSA
122298427 5265 Fabidae View MSA
124036456 5270 Rosid View MSA
123744092 5271 Pentapetalae View MSA
122770898 5272 Eudicot View MSA
121349184 5274 Embryophyte View MSA
123381202 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.932075 0.0 22.7488   High
cufflinks 0.158312 0.0 9.23107 Low  
cufflinks 0.377574 0.0 15.6363    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.419       High
cufflinks 0.59        
cufflinks 1.704        
cufflinks 1.151        
cufflinks 4.823       High
cufflinks 1.653        
cufflinks 0.744        
cufflinks 2.611        
cufflinks 0.741        
cufflinks 2.099        
cufflinks 0.822        
cufflinks 0.093       Low
cufflinks 1.227        
cufflinks 3.695       High
cufflinks 0.363       Low
cufflinks 0.908        
cufflinks 0.191       Low

0 Strain