Gene : Glyma.03G094200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  942
Name:  ? Glyma.03G094200 Secondary Identifier:  ? PAC:30516048
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G094200 0.5kb upstream 0.5kb upstream 8862 true Chr03: 27857051-27865912 Glycine max
Glyma.03G094200 0.5kb upstream 0.5kb upstream 500 false Chr03: 27865413-27865912 Glycine max
Glyma.03G094200 0.5kb downstream 0.5kb downstream 8862 true Chr03: 27856551-27865412 Glycine max
Glyma.03G094200 0.5kb downstream 0.5kb downstream 500 false Chr03: 27856551-27857050 Glycine max
Glyma.03G094200 1.0kb upstream 1.0kb upstream 9362 true Chr03: 27857051-27866412 Glycine max
Glyma.03G094200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27865413-27866412 Glycine max
Glyma.03G094200 1.0kb downstream 1.0kb downstream 9362 true Chr03: 27856051-27865412 Glycine max
Glyma.03G094200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27856051-27857050 Glycine max
Glyma.03G094200 2.0kb upstream 2.0kb upstream 10362 true Chr03: 27857051-27867412 Glycine max
Glyma.03G094200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27865413-27867412 Glycine max
Glyma.03G094200 2.0kb downstream 2.0kb downstream 10362 true Chr03: 27855051-27865412 Glycine max
Glyma.03G094200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27855051-27857050 Glycine max
Glyma.03G094200 5.0kb upstream 5.0kb upstream 13362 true Chr03: 27857051-27870412 Glycine max
Glyma.03G094200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27865413-27870412 Glycine max
Glyma.03G094200 5.0kb downstream 5.0kb downstream 13362 true Chr03: 27852051-27865412 Glycine max
Glyma.03G094200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27852051-27857050 Glycine max
Glyma.03G094200 10.0kb upstream 10.0kb upstream 18362 true Chr03: 27857051-27875412 Glycine max
Glyma.03G094200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27865413-27875412 Glycine max
Glyma.03G094200 10.0kb downstream 10.0kb downstream 18362 true Chr03: 27847051-27865412 Glycine max
Glyma.03G094200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27847051-27857050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300488 5265 Fabidae View MSA
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.928398 0.0 3.23006   Low
cufflinks 7.1535 0.0 19.5061   High
cufflinks 1.47505 0.0 4.8577   Low
cufflinks 3.16044 0.0 9.36443    
cufflinks 3.40434 0.0 10.006    
cufflinks 2.16382 0.0 6.77531    
cufflinks 4.52282 0.0 12.8415    
cufflinks 3.97139 0.0 11.4427    
cufflinks 4.30853 0.0 12.3011    
cufflinks 0.642        
cufflinks 0.267       Low
cufflinks 0.851        
cufflinks 0.908        
cufflinks 1.29       High
cufflinks 0.585        
cufflinks 0.634        
cufflinks 0.434        
cufflinks 0.952        
cufflinks 2.121       High
cufflinks 0.454        
cufflinks 0.236       Low
cufflinks 0.58        
cufflinks 1.269       High
cufflinks 0.234       Low
cufflinks 0.527        
cufflinks 0.295       Low

0 Strain