Gene : Glyma.03G092700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  927
Name:  ? Glyma.03G092700 Secondary Identifier:  ? PAC:30517166
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G092700 0.5kb upstream 0.5kb upstream 6401 true Chr03: 27384348-27390748 Glycine max
Glyma.03G092700 0.5kb upstream 0.5kb upstream 500 false Chr03: 27390249-27390748 Glycine max
Glyma.03G092700 0.5kb downstream 0.5kb downstream 6401 true Chr03: 27383848-27390248 Glycine max
Glyma.03G092700 0.5kb downstream 0.5kb downstream 500 false Chr03: 27383848-27384347 Glycine max
Glyma.03G092700 1.0kb upstream 1.0kb upstream 6901 true Chr03: 27384348-27391248 Glycine max
Glyma.03G092700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27390249-27391248 Glycine max
Glyma.03G092700 1.0kb downstream 1.0kb downstream 6901 true Chr03: 27383348-27390248 Glycine max
Glyma.03G092700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27383348-27384347 Glycine max
Glyma.03G092700 2.0kb upstream 2.0kb upstream 7901 true Chr03: 27384348-27392248 Glycine max
Glyma.03G092700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27390249-27392248 Glycine max
Glyma.03G092700 2.0kb downstream 2.0kb downstream 7901 true Chr03: 27382348-27390248 Glycine max
Glyma.03G092700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27382348-27384347 Glycine max
Glyma.03G092700 5.0kb upstream 5.0kb upstream 10901 true Chr03: 27384348-27395248 Glycine max
Glyma.03G092700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27390249-27395248 Glycine max
Glyma.03G092700 5.0kb downstream 5.0kb downstream 10901 true Chr03: 27379348-27390248 Glycine max
Glyma.03G092700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27379348-27384347 Glycine max
Glyma.03G092700 10.0kb upstream 10.0kb upstream 15901 true Chr03: 27384348-27400248 Glycine max
Glyma.03G092700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27390249-27400248 Glycine max
Glyma.03G092700 10.0kb downstream 10.0kb downstream 15901 true Chr03: 27374348-27390248 Glycine max
Glyma.03G092700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27374348-27384347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306260 5265 Fabidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.412 0.0 10.4235   Low
cufflinks 20.3422 0.0 54.3057 High  
cufflinks 7.58684 0.0 20.9942   Low
cufflinks 25.6599 0.0 68.9001 High  
cufflinks 55.3856 0.0 157.986 High  
cufflinks 30.6642 0.0 83.0136 High  
cufflinks 46.6066 0.0 130.48 High  
cufflinks 28.2834 0.0 76.2445 High  
cufflinks 106.98 0.0 338.548 High High
cufflinks 5.922        
cufflinks 2.232        
cufflinks 5.185        
cufflinks 15.38     High High
cufflinks 16.957     High High
cufflinks 17.946     High High
cufflinks 2.252        
cufflinks 7.745     High  
cufflinks 10.817     High  
cufflinks 6.741        
cufflinks 1.189       Low
cufflinks 3.51        
cufflinks 1.651       Low
cufflinks 3.464        
cufflinks 3.409        
cufflinks 1.522       Low
cufflinks 6.086        

0 Strain