Gene : Glyma.19G089800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11689:SF67 - CHLORIDE CHANNEL PROTEIN CLC-A-RELATED Genomic Order:  898
Name:  ? Glyma.19G089800 Secondary Identifier:  ? PAC:30512540
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G089800 0.5kb upstream 0.5kb upstream 6933 true Chr19: 31930998-31937930 Glycine max
Glyma.19G089800 0.5kb upstream 0.5kb upstream 500 false Chr19: 31937431-31937930 Glycine max
Glyma.19G089800 0.5kb downstream 0.5kb downstream 6933 true Chr19: 31930498-31937430 Glycine max
Glyma.19G089800 0.5kb downstream 0.5kb downstream 500 false Chr19: 31930498-31930997 Glycine max
Glyma.19G089800 1.0kb upstream 1.0kb upstream 7433 true Chr19: 31930998-31938430 Glycine max
Glyma.19G089800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 31937431-31938430 Glycine max
Glyma.19G089800 1.0kb downstream 1.0kb downstream 7433 true Chr19: 31929998-31937430 Glycine max
Glyma.19G089800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 31929998-31930997 Glycine max
Glyma.19G089800 2.0kb upstream 2.0kb upstream 8433 true Chr19: 31930998-31939430 Glycine max
Glyma.19G089800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 31937431-31939430 Glycine max
Glyma.19G089800 2.0kb downstream 2.0kb downstream 8433 true Chr19: 31928998-31937430 Glycine max
Glyma.19G089800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 31928998-31930997 Glycine max
Glyma.19G089800 5.0kb upstream 5.0kb upstream 11433 true Chr19: 31930998-31942430 Glycine max
Glyma.19G089800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 31937431-31942430 Glycine max
Glyma.19G089800 5.0kb downstream 5.0kb downstream 11433 true Chr19: 31925998-31937430 Glycine max
Glyma.19G089800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 31925998-31930997 Glycine max
Glyma.19G089800 10.0kb upstream 10.0kb upstream 16433 true Chr19: 31930998-31947430 Glycine max
Glyma.19G089800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 31937431-31947430 Glycine max
Glyma.19G089800 10.0kb downstream 10.0kb downstream 16433 true Chr19: 31920998-31937430 Glycine max
Glyma.19G089800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 31920998-31930997 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301169 5265 Fabidae View MSA
124064691 5270 Rosid View MSA
123741834 5271 Pentapetalae View MSA
122788464 5272 Eudicot View MSA
122042930 5273 Angiosperm View MSA
121310046 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.92746 0.0 18.7929    
cufflinks 0.474636 0.0 8.93591    
cufflinks 7.47155 0.0 38.5417   High
cufflinks 0.188092 0.0 3.97466    
cufflinks 1.58584 0.0 7.58324    
cufflinks 0.11699 0.0 0.924067 Low Low
cufflinks 0.129575 0.0 1.0218 Low Low
cufflinks 1.15739 0.0 6.69412    
cufflinks 3.03737 0.0 11.854    
cufflinks 0.125        
cufflinks 0.175        
cufflinks 1.605       High
cufflinks 0.008     Low Low
cufflinks 0.021     Low Low
cufflinks 1.207       High
cufflinks 1.35       High
cufflinks 0.046     Low Low
cufflinks 0.553        
cufflinks 0.111        
cufflinks 0.91        
cufflinks 0.268        
cufflinks 0.281        
cufflinks 0.094     Low  
cufflinks 0.333        
cufflinks 0.631        
cufflinks 0.399        

0 Strain