Gene : Glyma.03G097900 G. max Wm82.a2.v1
Defline:  (1 of 6) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  979
Name:  ? Glyma.03G097900 Secondary Identifier:  ? PAC:30519131
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5188 Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G097900 0.5kb upstream 0.5kb upstream 9639 true Chr03: 28558709-28568347 Glycine max
Glyma.03G097900 0.5kb upstream 0.5kb upstream 500 false Chr03: 28567848-28568347 Glycine max
Glyma.03G097900 0.5kb downstream 0.5kb downstream 9639 true Chr03: 28558209-28567847 Glycine max
Glyma.03G097900 0.5kb downstream 0.5kb downstream 500 false Chr03: 28558209-28558708 Glycine max
Glyma.03G097900 1.0kb upstream 1.0kb upstream 10139 true Chr03: 28558709-28568847 Glycine max
Glyma.03G097900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28567848-28568847 Glycine max
Glyma.03G097900 1.0kb downstream 1.0kb downstream 10139 true Chr03: 28557709-28567847 Glycine max
Glyma.03G097900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28557709-28558708 Glycine max
Glyma.03G097900 2.0kb upstream 2.0kb upstream 11139 true Chr03: 28558709-28569847 Glycine max
Glyma.03G097900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28567848-28569847 Glycine max
Glyma.03G097900 2.0kb downstream 2.0kb downstream 11139 true Chr03: 28556709-28567847 Glycine max
Glyma.03G097900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28556709-28558708 Glycine max
Glyma.03G097900 5.0kb upstream 5.0kb upstream 14139 true Chr03: 28558709-28572847 Glycine max
Glyma.03G097900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28567848-28572847 Glycine max
Glyma.03G097900 5.0kb downstream 5.0kb downstream 14139 true Chr03: 28553709-28567847 Glycine max
Glyma.03G097900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28553709-28558708 Glycine max
Glyma.03G097900 10.0kb upstream 10.0kb upstream 19139 true Chr03: 28558709-28577847 Glycine max
Glyma.03G097900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28567848-28577847 Glycine max
Glyma.03G097900 10.0kb downstream 10.0kb downstream 19139 true Chr03: 28548709-28567847 Glycine max
Glyma.03G097900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28548709-28558708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301417 5265 Fabidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0253 0.0 60.1464   High
cufflinks 13.9142 0.0 41.3677    
cufflinks 7.23023 0.0 22.7631   Low
cufflinks 10.3226 0.0 36.3549    
cufflinks 10.5724 0.0 37.3799    
cufflinks 6.82177 0.0 21.7703   Low
cufflinks 11.8604 0.0 35.7558    
cufflinks 9.03355 0.0 27.6569    
cufflinks 9.32682 0.0 28.3261    
cufflinks 1.265        
cufflinks 0.632       Low
cufflinks 1.238        
cufflinks 1.021        
cufflinks 1.083        
cufflinks 1.495        
cufflinks 3.249       High
cufflinks 0.627       Low
cufflinks 1.314        
cufflinks 1.805        
cufflinks 2.954       High
cufflinks 0.654       Low
cufflinks 2.725       High
cufflinks 2.848       High
cufflinks 0.55       Low
cufflinks 2.92       High
cufflinks 0.559       Low

0 Strain