Gene : Glyma.03G097700 G. max Wm82.a2.v1
Defline:  (1 of 4) PF12070 - Protein of unknown function (DUF3550/UPF0682) (DUF3550) Genomic Order:  977
Name:  ? Glyma.03G097700 Secondary Identifier:  ? PAC:30515949
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G097700 0.5kb upstream 0.5kb upstream 11835 true Chr03: 28540771-28552605 Glycine max
Glyma.03G097700 0.5kb upstream 0.5kb upstream 500 false Chr03: 28540771-28541270 Glycine max
Glyma.03G097700 0.5kb downstream 0.5kb downstream 11835 true Chr03: 28541271-28553105 Glycine max
Glyma.03G097700 0.5kb downstream 0.5kb downstream 500 false Chr03: 28552606-28553105 Glycine max
Glyma.03G097700 1.0kb upstream 1.0kb upstream 12335 true Chr03: 28540271-28552605 Glycine max
Glyma.03G097700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28540271-28541270 Glycine max
Glyma.03G097700 1.0kb downstream 1.0kb downstream 12335 true Chr03: 28541271-28553605 Glycine max
Glyma.03G097700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28552606-28553605 Glycine max
Glyma.03G097700 2.0kb upstream 2.0kb upstream 13335 true Chr03: 28539271-28552605 Glycine max
Glyma.03G097700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28539271-28541270 Glycine max
Glyma.03G097700 2.0kb downstream 2.0kb downstream 13335 true Chr03: 28541271-28554605 Glycine max
Glyma.03G097700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28552606-28554605 Glycine max
Glyma.03G097700 5.0kb upstream 5.0kb upstream 16335 true Chr03: 28536271-28552605 Glycine max
Glyma.03G097700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28536271-28541270 Glycine max
Glyma.03G097700 5.0kb downstream 5.0kb downstream 16335 true Chr03: 28541271-28557605 Glycine max
Glyma.03G097700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28552606-28557605 Glycine max
Glyma.03G097700 10.0kb upstream 10.0kb upstream 21335 true Chr03: 28531271-28552605 Glycine max
Glyma.03G097700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28531271-28541270 Glycine max
Glyma.03G097700 10.0kb downstream 10.0kb downstream 21335 true Chr03: 28541271-28562605 Glycine max
Glyma.03G097700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28552606-28562605 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309041 5265 Fabidae View MSA
124066790 5270 Rosid View MSA
123739953 5271 Pentapetalae View MSA
122791908 5272 Eudicot View MSA
122047130 5273 Angiosperm View MSA
121349803 5274 Embryophyte View MSA
123425537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.0263 0.0 19.2776   Low
cufflinks 6.8024 0.0 24.662    
cufflinks 10.2185 0.0 35.1841    
cufflinks 11.3235 0.0 38.9453   High
cufflinks 6.31709 0.0 23.2204   Low
cufflinks 9.79631 0.0 33.807    
cufflinks 10.1541 0.0 35.3651    
cufflinks 8.91205 0.0 30.9914    
cufflinks 8.95497 0.0 27.1853    
cufflinks 0.797        
cufflinks 0.834        
cufflinks 1.069       High
cufflinks 0.752        
cufflinks 0.696        
cufflinks 0.621       Low
cufflinks 0.629        
cufflinks 0.575       Low
cufflinks 0.82        
cufflinks 0.741        
cufflinks 0.742        
cufflinks 0.769        
cufflinks 0.709        
cufflinks 0.672        
cufflinks 0.739        
cufflinks 0.667        
cufflinks 0.581       Low

0 Strain