Gene : Glyma.03G098700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  987
Name:  ? Glyma.03G098700 Secondary Identifier:  ? PAC:30517373
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G098700 0.5kb upstream 0.5kb upstream 3160 true Chr03: 28682253-28685412 Glycine max
Glyma.03G098700 0.5kb upstream 0.5kb upstream 500 false Chr03: 28684913-28685412 Glycine max
Glyma.03G098700 0.5kb downstream 0.5kb downstream 3160 true Chr03: 28681753-28684912 Glycine max
Glyma.03G098700 0.5kb downstream 0.5kb downstream 500 false Chr03: 28681753-28682252 Glycine max
Glyma.03G098700 1.0kb upstream 1.0kb upstream 3660 true Chr03: 28682253-28685912 Glycine max
Glyma.03G098700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28684913-28685912 Glycine max
Glyma.03G098700 1.0kb downstream 1.0kb downstream 3660 true Chr03: 28681253-28684912 Glycine max
Glyma.03G098700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28681253-28682252 Glycine max
Glyma.03G098700 2.0kb upstream 2.0kb upstream 4660 true Chr03: 28682253-28686912 Glycine max
Glyma.03G098700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28684913-28686912 Glycine max
Glyma.03G098700 2.0kb downstream 2.0kb downstream 4660 true Chr03: 28680253-28684912 Glycine max
Glyma.03G098700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28680253-28682252 Glycine max
Glyma.03G098700 5.0kb upstream 5.0kb upstream 7660 true Chr03: 28682253-28689912 Glycine max
Glyma.03G098700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28684913-28689912 Glycine max
Glyma.03G098700 5.0kb downstream 5.0kb downstream 7660 true Chr03: 28677253-28684912 Glycine max
Glyma.03G098700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28677253-28682252 Glycine max
Glyma.03G098700 10.0kb upstream 10.0kb upstream 12660 true Chr03: 28682253-28694912 Glycine max
Glyma.03G098700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28684913-28694912 Glycine max
Glyma.03G098700 10.0kb downstream 10.0kb downstream 12660 true Chr03: 28672253-28684912 Glycine max
Glyma.03G098700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28672253-28682252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314468 5265 Fabidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0182187 0.0 0.0836997 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0213186 0.0 0.096424 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain