Gene : Glyma.03G108100 G. max Wm82.a2.v1
Defline:  (1 of 701) PF01535 - PPR repeat (PPR) Genomic Order:  1081
Name:  ? Glyma.03G108100 Secondary Identifier:  ? PAC:30517313
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G108100 0.5kb upstream 0.5kb upstream 4595 true Chr03: 30858539-30863133 Glycine max
Glyma.03G108100 0.5kb upstream 0.5kb upstream 500 false Chr03: 30862634-30863133 Glycine max
Glyma.03G108100 0.5kb downstream 0.5kb downstream 4595 true Chr03: 30858039-30862633 Glycine max
Glyma.03G108100 0.5kb downstream 0.5kb downstream 500 false Chr03: 30858039-30858538 Glycine max
Glyma.03G108100 1.0kb upstream 1.0kb upstream 5095 true Chr03: 30858539-30863633 Glycine max
Glyma.03G108100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30862634-30863633 Glycine max
Glyma.03G108100 1.0kb downstream 1.0kb downstream 5095 true Chr03: 30857539-30862633 Glycine max
Glyma.03G108100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30857539-30858538 Glycine max
Glyma.03G108100 2.0kb upstream 2.0kb upstream 6095 true Chr03: 30858539-30864633 Glycine max
Glyma.03G108100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30862634-30864633 Glycine max
Glyma.03G108100 2.0kb downstream 2.0kb downstream 6095 true Chr03: 30856539-30862633 Glycine max
Glyma.03G108100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30856539-30858538 Glycine max
Glyma.03G108100 5.0kb upstream 5.0kb upstream 9095 true Chr03: 30858539-30867633 Glycine max
Glyma.03G108100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30862634-30867633 Glycine max
Glyma.03G108100 5.0kb downstream 5.0kb downstream 9095 true Chr03: 30853539-30862633 Glycine max
Glyma.03G108100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30853539-30858538 Glycine max
Glyma.03G108100 10.0kb upstream 10.0kb upstream 14095 true Chr03: 30858539-30872633 Glycine max
Glyma.03G108100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30862634-30872633 Glycine max
Glyma.03G108100 10.0kb downstream 10.0kb downstream 14095 true Chr03: 30848539-30862633 Glycine max
Glyma.03G108100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30848539-30858538 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304708 5265 Fabidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3531 0.0 34.8677   High
cufflinks 6.79377 0.0 24.1082   High
cufflinks 2.09387 0.0 8.56277    
cufflinks 2.47692 0.0 9.65805    
cufflinks 2.34339 0.0 9.43398    
cufflinks 2.79234 0.0 10.5711    
cufflinks 2.73772 0.0 10.5328    
cufflinks 2.7103 0.0 10.2334    
cufflinks 2.98909 0.0 11.0077    
cufflinks 0.623        
cufflinks 0.202       Low
cufflinks 1.063        
cufflinks 0.677        
cufflinks 0.782        
cufflinks 0.622        
cufflinks 3.102       High
cufflinks 0.123       Low
cufflinks 1.086        
cufflinks 1.998        
cufflinks 3.934       High
cufflinks 0.29        
cufflinks 3.448       High
cufflinks 4.24       High
cufflinks 0.291        
cufflinks 3.311       High
cufflinks 0.205       Low

0 Strain