Gene : Glyma.03G114600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  1146
Name:  ? Glyma.03G114600 Secondary Identifier:  ? PAC:30516667
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G114600 0.5kb upstream 0.5kb upstream 2728 true Chr03: 32187061-32189788 Glycine max
Glyma.03G114600 0.5kb upstream 0.5kb upstream 500 false Chr03: 32187061-32187560 Glycine max
Glyma.03G114600 0.5kb downstream 0.5kb downstream 2728 true Chr03: 32187561-32190288 Glycine max
Glyma.03G114600 0.5kb downstream 0.5kb downstream 500 false Chr03: 32189789-32190288 Glycine max
Glyma.03G114600 1.0kb upstream 1.0kb upstream 3228 true Chr03: 32186561-32189788 Glycine max
Glyma.03G114600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32186561-32187560 Glycine max
Glyma.03G114600 1.0kb downstream 1.0kb downstream 3228 true Chr03: 32187561-32190788 Glycine max
Glyma.03G114600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32189789-32190788 Glycine max
Glyma.03G114600 2.0kb upstream 2.0kb upstream 4228 true Chr03: 32185561-32189788 Glycine max
Glyma.03G114600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32185561-32187560 Glycine max
Glyma.03G114600 2.0kb downstream 2.0kb downstream 4228 true Chr03: 32187561-32191788 Glycine max
Glyma.03G114600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32189789-32191788 Glycine max
Glyma.03G114600 5.0kb upstream 5.0kb upstream 7228 true Chr03: 32182561-32189788 Glycine max
Glyma.03G114600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32182561-32187560 Glycine max
Glyma.03G114600 5.0kb downstream 5.0kb downstream 7228 true Chr03: 32187561-32194788 Glycine max
Glyma.03G114600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32189789-32194788 Glycine max
Glyma.03G114600 10.0kb upstream 10.0kb upstream 12228 true Chr03: 32177561-32189788 Glycine max
Glyma.03G114600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32177561-32187560 Glycine max
Glyma.03G114600 10.0kb downstream 10.0kb downstream 12228 true Chr03: 32187561-32199788 Glycine max
Glyma.03G114600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32189789-32199788 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306013 5265 Fabidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 355.457 0.0 1356.66 High High
cufflinks 268.627 0.0 952.105 High High
cufflinks 60.3042 0.0 166.92 High  
cufflinks 181.348 0.0 589.659 High  
cufflinks 16.8892 0.0 45.5545   Low
cufflinks 20.6303 0.0 55.2367   Low
cufflinks 135.448 0.0 416.371 High  
cufflinks 110.195 0.0 329.52 High  
cufflinks 11.3197 0.0 31.3135   Low
cufflinks 129.393     High  
cufflinks 0.371       Low
cufflinks 67.761     High  
cufflinks 1.282        
cufflinks 0.114       Low
cufflinks 0.844        
cufflinks 413.138     High High
cufflinks 0.814        
cufflinks 78.801     High  
cufflinks 113.135     High  
cufflinks 461.597     High High
cufflinks 0.669        
cufflinks 413.892     High High
cufflinks 356.081     High High
cufflinks 0.556        
cufflinks 480.229     High High
cufflinks 0.593        

0 Strain