Gene : Glyma.03G119500 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase Genomic Order:  1195
Name:  ? Glyma.03G119500 Secondary Identifier:  ? PAC:30517015
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G119500 0.5kb upstream 0.5kb upstream 3653 true Chr03: 33055261-33058913 Glycine max
Glyma.03G119500 0.5kb upstream 0.5kb upstream 500 false Chr03: 33058414-33058913 Glycine max
Glyma.03G119500 0.5kb downstream 0.5kb downstream 3653 true Chr03: 33054761-33058413 Glycine max
Glyma.03G119500 0.5kb downstream 0.5kb downstream 500 false Chr03: 33054761-33055260 Glycine max
Glyma.03G119500 1.0kb upstream 1.0kb upstream 4153 true Chr03: 33055261-33059413 Glycine max
Glyma.03G119500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33058414-33059413 Glycine max
Glyma.03G119500 1.0kb downstream 1.0kb downstream 4153 true Chr03: 33054261-33058413 Glycine max
Glyma.03G119500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33054261-33055260 Glycine max
Glyma.03G119500 2.0kb upstream 2.0kb upstream 5153 true Chr03: 33055261-33060413 Glycine max
Glyma.03G119500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33058414-33060413 Glycine max
Glyma.03G119500 2.0kb downstream 2.0kb downstream 5153 true Chr03: 33053261-33058413 Glycine max
Glyma.03G119500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33053261-33055260 Glycine max
Glyma.03G119500 5.0kb upstream 5.0kb upstream 8153 true Chr03: 33055261-33063413 Glycine max
Glyma.03G119500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33058414-33063413 Glycine max
Glyma.03G119500 5.0kb downstream 5.0kb downstream 8153 true Chr03: 33050261-33058413 Glycine max
Glyma.03G119500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33050261-33055260 Glycine max
Glyma.03G119500 10.0kb upstream 10.0kb upstream 13153 true Chr03: 33055261-33068413 Glycine max
Glyma.03G119500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33058414-33068413 Glycine max
Glyma.03G119500 10.0kb downstream 10.0kb downstream 13153 true Chr03: 33045261-33058413 Glycine max
Glyma.03G119500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33045261-33055260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306343 5265 Fabidae View MSA
124064465 5270 Rosid View MSA
123737213 5271 Pentapetalae View MSA
122789972 5272 Eudicot View MSA
122044823 5273 Angiosperm View MSA
121345959 5274 Embryophyte View MSA
123424479 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 190.903 0.0 694.099 High High
cufflinks 145.064 0.0 493.098 High High
cufflinks 29.3883 0.0 79.5934 High  
cufflinks 97.7885 0.0 307.56 High  
cufflinks 16.1245 0.0 43.0315    
cufflinks 16.3872 0.0 43.7255    
cufflinks 92.0106 0.0 285.379 High  
cufflinks 61.3158 0.0 179.3 High  
cufflinks 6.24016 0.0 17.5285   Low
cufflinks 87.617     High  
cufflinks 0.199       Low
cufflinks 37.599     High  
cufflinks 2.214        
cufflinks 1.551        
cufflinks 0.476       Low
cufflinks 238.662     High High
cufflinks 0.697        
cufflinks 40.203     High  
cufflinks 88.35     High  
cufflinks 250.567     High High
cufflinks 0.357       Low
cufflinks 266.806     High High
cufflinks 186.528     High High
cufflinks 0.164       Low
cufflinks 280.831     High High
cufflinks 0.538        

0 Strain