Gene : Glyma.19G131600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  1316
Name:  ? Glyma.19G131600 Secondary Identifier:  ? PAC:30512493
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G131600 0.5kb upstream 0.5kb upstream 4393 true Chr19: 39215058-39219450 Glycine max
Glyma.19G131600 0.5kb upstream 0.5kb upstream 500 false Chr19: 39215058-39215557 Glycine max
Glyma.19G131600 0.5kb downstream 0.5kb downstream 4393 true Chr19: 39215558-39219950 Glycine max
Glyma.19G131600 0.5kb downstream 0.5kb downstream 500 false Chr19: 39219451-39219950 Glycine max
Glyma.19G131600 1.0kb upstream 1.0kb upstream 4893 true Chr19: 39214558-39219450 Glycine max
Glyma.19G131600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39214558-39215557 Glycine max
Glyma.19G131600 1.0kb downstream 1.0kb downstream 4893 true Chr19: 39215558-39220450 Glycine max
Glyma.19G131600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39219451-39220450 Glycine max
Glyma.19G131600 2.0kb upstream 2.0kb upstream 5893 true Chr19: 39213558-39219450 Glycine max
Glyma.19G131600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39213558-39215557 Glycine max
Glyma.19G131600 2.0kb downstream 2.0kb downstream 5893 true Chr19: 39215558-39221450 Glycine max
Glyma.19G131600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39219451-39221450 Glycine max
Glyma.19G131600 5.0kb upstream 5.0kb upstream 8893 true Chr19: 39210558-39219450 Glycine max
Glyma.19G131600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39210558-39215557 Glycine max
Glyma.19G131600 5.0kb downstream 5.0kb downstream 8893 true Chr19: 39215558-39224450 Glycine max
Glyma.19G131600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39219451-39224450 Glycine max
Glyma.19G131600 10.0kb upstream 10.0kb upstream 13893 true Chr19: 39205558-39219450 Glycine max
Glyma.19G131600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39205558-39215557 Glycine max
Glyma.19G131600 10.0kb downstream 10.0kb downstream 13893 true Chr19: 39215558-39229450 Glycine max
Glyma.19G131600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39219451-39229450 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301583 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96179 0.0 21.5983    
cufflinks 6.30523 0.0 20.7137    
cufflinks 4.85142 0.0 16.8099    
cufflinks 3.90345 0.0 14.3676    
cufflinks 10.9764 0.0 48.6389   High
cufflinks 15.7436 0.0 51.5601   High
cufflinks 3.24559 0.0 12.715   Low
cufflinks 8.00184 0.0 24.17    
cufflinks 8.49175 0.0 32.6793    
cufflinks 0.49        
cufflinks 0.548        
cufflinks 0.408        
cufflinks 1.001       High
cufflinks 1.087       High
cufflinks 0.459        
cufflinks 0.52        
cufflinks 0.514        
cufflinks 0.789       High
cufflinks 0.552        
cufflinks 0.439        
cufflinks 0.498        
cufflinks 0.408        
cufflinks 0.361       Low
cufflinks 0.656        
cufflinks 0.431        
cufflinks 0.616        

0 Strain