Gene : Glyma.04G090600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22601:SF11 - OLIGOPEPTIDE TRANSPORTER 4 Genomic Order:  906
Name:  ? Glyma.04G090600 Secondary Identifier:  ? PAC:30490633
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G090600 0.5kb upstream 0.5kb upstream 5976 true Chr04: 7973302-7979277 Glycine max
Glyma.04G090600 0.5kb upstream 0.5kb upstream 500 false Chr04: 7973302-7973801 Glycine max
Glyma.04G090600 0.5kb downstream 0.5kb downstream 5976 true Chr04: 7973802-7979777 Glycine max
Glyma.04G090600 0.5kb downstream 0.5kb downstream 500 false Chr04: 7979278-7979777 Glycine max
Glyma.04G090600 1.0kb upstream 1.0kb upstream 6476 true Chr04: 7972802-7979277 Glycine max
Glyma.04G090600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7972802-7973801 Glycine max
Glyma.04G090600 1.0kb downstream 1.0kb downstream 6476 true Chr04: 7973802-7980277 Glycine max
Glyma.04G090600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7979278-7980277 Glycine max
Glyma.04G090600 2.0kb upstream 2.0kb upstream 7476 true Chr04: 7971802-7979277 Glycine max
Glyma.04G090600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7971802-7973801 Glycine max
Glyma.04G090600 2.0kb downstream 2.0kb downstream 7476 true Chr04: 7973802-7981277 Glycine max
Glyma.04G090600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7979278-7981277 Glycine max
Glyma.04G090600 5.0kb upstream 5.0kb upstream 10476 true Chr04: 7968802-7979277 Glycine max
Glyma.04G090600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7968802-7973801 Glycine max
Glyma.04G090600 5.0kb downstream 5.0kb downstream 10476 true Chr04: 7973802-7984277 Glycine max
Glyma.04G090600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7979278-7984277 Glycine max
Glyma.04G090600 10.0kb upstream 10.0kb upstream 15476 true Chr04: 7963802-7979277 Glycine max
Glyma.04G090600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7963802-7973801 Glycine max
Glyma.04G090600 10.0kb downstream 10.0kb downstream 15476 true Chr04: 7973802-7989277 Glycine max
Glyma.04G090600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7979278-7989277 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238945 5265 Fabidae Singleton cluster - no MSA
124039781 5270 Rosid View MSA
123753385 5271 Pentapetalae View MSA
122775084 5272 Eudicot View MSA
122048863 5273 Angiosperm View MSA
121311143 5274 Embryophyte View MSA
123348480 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0593323 0.0 0.246039 Low Low
cufflinks 0.4246 0.0 1.62054    
cufflinks 0.249132 0.0 0.970853    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.619401 0.0 2.3175    
cufflinks 0.74809 0.0 2.76929   High
cufflinks 0.156366 0.0 0.619609 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain