Gene : Glyma.04G086500 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase Genomic Order:  865
Name:  ? Glyma.04G086500 Secondary Identifier:  ? PAC:30488787
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G086500 0.5kb upstream 0.5kb upstream 7985 true Chr04: 7353687-7361671 Glycine max
Glyma.04G086500 0.5kb upstream 0.5kb upstream 500 false Chr04: 7353687-7354186 Glycine max
Glyma.04G086500 0.5kb downstream 0.5kb downstream 7985 true Chr04: 7354187-7362171 Glycine max
Glyma.04G086500 0.5kb downstream 0.5kb downstream 500 false Chr04: 7361672-7362171 Glycine max
Glyma.04G086500 1.0kb upstream 1.0kb upstream 8485 true Chr04: 7353187-7361671 Glycine max
Glyma.04G086500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7353187-7354186 Glycine max
Glyma.04G086500 1.0kb downstream 1.0kb downstream 8485 true Chr04: 7354187-7362671 Glycine max
Glyma.04G086500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7361672-7362671 Glycine max
Glyma.04G086500 2.0kb upstream 2.0kb upstream 9485 true Chr04: 7352187-7361671 Glycine max
Glyma.04G086500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7352187-7354186 Glycine max
Glyma.04G086500 2.0kb downstream 2.0kb downstream 9485 true Chr04: 7354187-7363671 Glycine max
Glyma.04G086500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7361672-7363671 Glycine max
Glyma.04G086500 5.0kb upstream 5.0kb upstream 12485 true Chr04: 7349187-7361671 Glycine max
Glyma.04G086500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7349187-7354186 Glycine max
Glyma.04G086500 5.0kb downstream 5.0kb downstream 12485 true Chr04: 7354187-7366671 Glycine max
Glyma.04G086500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7361672-7366671 Glycine max
Glyma.04G086500 10.0kb upstream 10.0kb upstream 17485 true Chr04: 7344187-7361671 Glycine max
Glyma.04G086500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7344187-7354186 Glycine max
Glyma.04G086500 10.0kb downstream 10.0kb downstream 17485 true Chr04: 7354187-7371671 Glycine max
Glyma.04G086500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7361672-7371671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308999 5265 Fabidae View MSA
124063283 5270 Rosid View MSA
123736955 5271 Pentapetalae View MSA
122787950 5272 Eudicot View MSA
122047133 5273 Angiosperm View MSA
121345289 5274 Embryophyte View MSA
123423978 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95995 0.0 26.7038   High
cufflinks 4.09683 0.0 19.1176    
cufflinks 2.21976 0.0 15.4543   Low
cufflinks 2.7154 0.0 19.516    
cufflinks 3.35785 0.0 22.3011    
cufflinks 2.37094 0.0 10.8885    
cufflinks 3.21306 0.0 18.2141    
cufflinks 2.22382 0.0 10.8619   Low
cufflinks 3.1492 0.0 18.3453    
cufflinks 0.146        
cufflinks 0.064       Low
cufflinks 0.158        
cufflinks 0.122        
cufflinks 0.174        
cufflinks 0.106        
cufflinks 0.341       High
cufflinks 0.079       Low
cufflinks 0.199        
cufflinks 0.264        
cufflinks 0.36       High
cufflinks 0.082       Low
cufflinks 0.337       High
cufflinks 0.43       High
cufflinks 0.076       Low
cufflinks 0.373       High
cufflinks 0.074       Low

0 Strain