Gene : Glyma.04G079300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  793
Name:  ? Glyma.04G079300 Secondary Identifier:  ? PAC:30488747
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G079300 0.5kb upstream 0.5kb upstream 1858 true Chr04: 6636115-6637972 Glycine max
Glyma.04G079300 0.5kb upstream 0.5kb upstream 500 false Chr04: 6637473-6637972 Glycine max
Glyma.04G079300 0.5kb downstream 0.5kb downstream 1858 true Chr04: 6635615-6637472 Glycine max
Glyma.04G079300 0.5kb downstream 0.5kb downstream 500 false Chr04: 6635615-6636114 Glycine max
Glyma.04G079300 1.0kb upstream 1.0kb upstream 2358 true Chr04: 6636115-6638472 Glycine max
Glyma.04G079300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6637473-6638472 Glycine max
Glyma.04G079300 1.0kb downstream 1.0kb downstream 2358 true Chr04: 6635115-6637472 Glycine max
Glyma.04G079300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6635115-6636114 Glycine max
Glyma.04G079300 2.0kb upstream 2.0kb upstream 3358 true Chr04: 6636115-6639472 Glycine max
Glyma.04G079300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6637473-6639472 Glycine max
Glyma.04G079300 2.0kb downstream 2.0kb downstream 3358 true Chr04: 6634115-6637472 Glycine max
Glyma.04G079300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6634115-6636114 Glycine max
Glyma.04G079300 5.0kb upstream 5.0kb upstream 6358 true Chr04: 6636115-6642472 Glycine max
Glyma.04G079300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6637473-6642472 Glycine max
Glyma.04G079300 5.0kb downstream 5.0kb downstream 6358 true Chr04: 6631115-6637472 Glycine max
Glyma.04G079300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6631115-6636114 Glycine max
Glyma.04G079300 10.0kb upstream 10.0kb upstream 11358 true Chr04: 6636115-6647472 Glycine max
Glyma.04G079300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6637473-6647472 Glycine max
Glyma.04G079300 10.0kb downstream 10.0kb downstream 11358 true Chr04: 6626115-6637472 Glycine max
Glyma.04G079300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6626115-6636114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311154 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.3313 0.0 4.7513    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.62191 0.0 8.69896    
cufflinks 0.0192733 0.0 0.0864839 Low Low
cufflinks 0.826897 0.0 3.04284    
cufflinks 14.1 0.0 38.4126   High
cufflinks 0.942049 0.0 3.44277    
cufflinks 0.333238 0.0 1.2759    
cufflinks 1.68485 0.0 5.88888    
cufflinks 0.023     Low Low
cufflinks 33.236     High High
cufflinks 0.945        
cufflinks 1.232        
cufflinks 1.579        
cufflinks 4.863        
cufflinks 0.05     Low  
cufflinks 4.844        
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low Low
cufflinks 52.361     High High
cufflinks 0.062     Low  
cufflinks 0.037     Low Low
cufflinks 43.606     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 38.065     High High

0 Strain