Gene : Glyma.19G132300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR26402:SF507 - TWO-COMPONENT RESPONSE REGULATOR ARR8-RELATED Genomic Order:  1323
Name:  ? Glyma.19G132300 Secondary Identifier:  ? PAC:30511401
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G132300 0.5kb upstream 0.5kb upstream 4508 true Chr19: 39293540-39298047 Glycine max
Glyma.19G132300 0.5kb upstream 0.5kb upstream 500 false Chr19: 39297548-39298047 Glycine max
Glyma.19G132300 0.5kb downstream 0.5kb downstream 4508 true Chr19: 39293040-39297547 Glycine max
Glyma.19G132300 0.5kb downstream 0.5kb downstream 500 false Chr19: 39293040-39293539 Glycine max
Glyma.19G132300 1.0kb upstream 1.0kb upstream 5008 true Chr19: 39293540-39298547 Glycine max
Glyma.19G132300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39297548-39298547 Glycine max
Glyma.19G132300 1.0kb downstream 1.0kb downstream 5008 true Chr19: 39292540-39297547 Glycine max
Glyma.19G132300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39292540-39293539 Glycine max
Glyma.19G132300 2.0kb upstream 2.0kb upstream 6008 true Chr19: 39293540-39299547 Glycine max
Glyma.19G132300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39297548-39299547 Glycine max
Glyma.19G132300 2.0kb downstream 2.0kb downstream 6008 true Chr19: 39291540-39297547 Glycine max
Glyma.19G132300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39291540-39293539 Glycine max
Glyma.19G132300 5.0kb upstream 5.0kb upstream 9008 true Chr19: 39293540-39302547 Glycine max
Glyma.19G132300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39297548-39302547 Glycine max
Glyma.19G132300 5.0kb downstream 5.0kb downstream 9008 true Chr19: 39288540-39297547 Glycine max
Glyma.19G132300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39288540-39293539 Glycine max
Glyma.19G132300 10.0kb upstream 10.0kb upstream 14008 true Chr19: 39293540-39307547 Glycine max
Glyma.19G132300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39297548-39307547 Glycine max
Glyma.19G132300 10.0kb downstream 10.0kb downstream 14008 true Chr19: 39283540-39297547 Glycine max
Glyma.19G132300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39283540-39293539 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300085 5265 Fabidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0373 0.0 44.2893    
cufflinks 18.9492 0.0 64.9713    
cufflinks 11.6513 0.0 41.1074    
cufflinks 11.8645 0.0 40.4568    
cufflinks 45.3524 0.0 161.792 High  
cufflinks 78.4683 0.0 308.203 High High
cufflinks 5.40135 0.0 22.3748   Low
cufflinks 26.178 0.0 88.023 High  
cufflinks 41.6373 0.0 142.482 High  
cufflinks 2.637        
cufflinks 2.234        
cufflinks 2.636        
cufflinks 13.071     High High
cufflinks 12.379     High High
cufflinks 4.948        
cufflinks 3.129        
cufflinks 0.58       Low
cufflinks 2.129        
cufflinks 1.889        
cufflinks 1.794        
cufflinks 2.209        
cufflinks 2.312        
cufflinks 2.924        
cufflinks 2.924        
cufflinks 1.92        
cufflinks 1.925        

0 Strain