Gene : Glyma.04G105500 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1055
Name:  ? Glyma.04G105500 Secondary Identifier:  ? PAC:30489785
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G105500 0.5kb upstream 0.5kb upstream 5269 true Chr04: 10440010-10445278 Glycine max
Glyma.04G105500 0.5kb upstream 0.5kb upstream 500 false Chr04: 10440010-10440509 Glycine max
Glyma.04G105500 0.5kb downstream 0.5kb downstream 5269 true Chr04: 10440510-10445778 Glycine max
Glyma.04G105500 0.5kb downstream 0.5kb downstream 500 false Chr04: 10445279-10445778 Glycine max
Glyma.04G105500 1.0kb upstream 1.0kb upstream 5769 true Chr04: 10439510-10445278 Glycine max
Glyma.04G105500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10439510-10440509 Glycine max
Glyma.04G105500 1.0kb downstream 1.0kb downstream 5769 true Chr04: 10440510-10446278 Glycine max
Glyma.04G105500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10445279-10446278 Glycine max
Glyma.04G105500 2.0kb upstream 2.0kb upstream 6769 true Chr04: 10438510-10445278 Glycine max
Glyma.04G105500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10438510-10440509 Glycine max
Glyma.04G105500 2.0kb downstream 2.0kb downstream 6769 true Chr04: 10440510-10447278 Glycine max
Glyma.04G105500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10445279-10447278 Glycine max
Glyma.04G105500 5.0kb upstream 5.0kb upstream 9769 true Chr04: 10435510-10445278 Glycine max
Glyma.04G105500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10435510-10440509 Glycine max
Glyma.04G105500 5.0kb downstream 5.0kb downstream 9769 true Chr04: 10440510-10450278 Glycine max
Glyma.04G105500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10445279-10450278 Glycine max
Glyma.04G105500 10.0kb upstream 10.0kb upstream 14769 true Chr04: 10430510-10445278 Glycine max
Glyma.04G105500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10430510-10440509 Glycine max
Glyma.04G105500 10.0kb downstream 10.0kb downstream 14769 true Chr04: 10440510-10455278 Glycine max
Glyma.04G105500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10445279-10455278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250366 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.64701 0.0 12.6729    
cufflinks 4.89261 0.0 16.4545    
cufflinks 3.48878 0.0 12.1007    
cufflinks 5.46905 0.0 18.0638    
cufflinks 1.93227 0.0 7.0207    
cufflinks 1.14787 0.0 4.29159    
cufflinks 0.0328739 0.0 0.149841 Low Low
cufflinks 1.31395 0.0 4.87488    
cufflinks 0.781462 0.0 2.97063    
cufflinks 0.095     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.003     Low Low
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low High
cufflinks 0.037     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain