Gene : Glyma.04G105900 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1059
Name:  ? Glyma.04G105900 Secondary Identifier:  ? PAC:30491191
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G105900 0.5kb upstream 0.5kb upstream 2938 true Chr04: 10788900-10791837 Glycine max
Glyma.04G105900 0.5kb upstream 0.5kb upstream 500 false Chr04: 10788900-10789399 Glycine max
Glyma.04G105900 0.5kb downstream 0.5kb downstream 2938 true Chr04: 10789400-10792337 Glycine max
Glyma.04G105900 0.5kb downstream 0.5kb downstream 500 false Chr04: 10791838-10792337 Glycine max
Glyma.04G105900 1.0kb upstream 1.0kb upstream 3438 true Chr04: 10788400-10791837 Glycine max
Glyma.04G105900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10788400-10789399 Glycine max
Glyma.04G105900 1.0kb downstream 1.0kb downstream 3438 true Chr04: 10789400-10792837 Glycine max
Glyma.04G105900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10791838-10792837 Glycine max
Glyma.04G105900 2.0kb upstream 2.0kb upstream 4438 true Chr04: 10787400-10791837 Glycine max
Glyma.04G105900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10787400-10789399 Glycine max
Glyma.04G105900 2.0kb downstream 2.0kb downstream 4438 true Chr04: 10789400-10793837 Glycine max
Glyma.04G105900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10791838-10793837 Glycine max
Glyma.04G105900 5.0kb upstream 5.0kb upstream 7438 true Chr04: 10784400-10791837 Glycine max
Glyma.04G105900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10784400-10789399 Glycine max
Glyma.04G105900 5.0kb downstream 5.0kb downstream 7438 true Chr04: 10789400-10796837 Glycine max
Glyma.04G105900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10791838-10796837 Glycine max
Glyma.04G105900 10.0kb upstream 10.0kb upstream 12438 true Chr04: 10779400-10791837 Glycine max
Glyma.04G105900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10779400-10789399 Glycine max
Glyma.04G105900 10.0kb downstream 10.0kb downstream 12438 true Chr04: 10789400-10801837 Glycine max
Glyma.04G105900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10791838-10801837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250366 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1984 0.0 71.868 High  
cufflinks 39.3741 0.0 105.635 High High
cufflinks 2.43108 0.0 8.70836    
cufflinks 4.98682 0.0 16.7605    
cufflinks 16.9313 0.0 48.2904    
cufflinks 7.49858 0.0 23.9485    
cufflinks 0.136096 0.0 0.55699 Low Low
cufflinks 6.14671 0.0 20.1248    
cufflinks 5.47863 0.0 18.231    
cufflinks 18.925     High  
cufflinks 1.0        
cufflinks 9.682     High  
cufflinks 9.018     High  
cufflinks 0.501        
cufflinks 0.056       Low
cufflinks 5.551        
cufflinks 0.827        
cufflinks 16.923     High  
cufflinks 19.302     High  
cufflinks 20.508     High  
cufflinks 0.983        
cufflinks 10.762     High  
cufflinks 18.457     High  
cufflinks 0.04     Low Low
cufflinks 11.253     High  
cufflinks 0.082       Low

0 Strain