Gene : Glyma.19G132900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14226 - NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER Genomic Order:  1329
Name:  ? Glyma.19G132900 Secondary Identifier:  ? PAC:30514504
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G132900 0.5kb upstream 0.5kb upstream 6092 true Chr19: 39419550-39425641 Glycine max
Glyma.19G132900 0.5kb upstream 0.5kb upstream 500 false Chr19: 39425142-39425641 Glycine max
Glyma.19G132900 0.5kb downstream 0.5kb downstream 6092 true Chr19: 39419050-39425141 Glycine max
Glyma.19G132900 0.5kb downstream 0.5kb downstream 500 false Chr19: 39419050-39419549 Glycine max
Glyma.19G132900 1.0kb upstream 1.0kb upstream 6592 true Chr19: 39419550-39426141 Glycine max
Glyma.19G132900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39425142-39426141 Glycine max
Glyma.19G132900 1.0kb downstream 1.0kb downstream 6592 true Chr19: 39418550-39425141 Glycine max
Glyma.19G132900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39418550-39419549 Glycine max
Glyma.19G132900 2.0kb upstream 2.0kb upstream 7592 true Chr19: 39419550-39427141 Glycine max
Glyma.19G132900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39425142-39427141 Glycine max
Glyma.19G132900 2.0kb downstream 2.0kb downstream 7592 true Chr19: 39417550-39425141 Glycine max
Glyma.19G132900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39417550-39419549 Glycine max
Glyma.19G132900 5.0kb upstream 5.0kb upstream 10592 true Chr19: 39419550-39430141 Glycine max
Glyma.19G132900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39425142-39430141 Glycine max
Glyma.19G132900 5.0kb downstream 5.0kb downstream 10592 true Chr19: 39414550-39425141 Glycine max
Glyma.19G132900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39414550-39419549 Glycine max
Glyma.19G132900 10.0kb upstream 10.0kb upstream 15592 true Chr19: 39419550-39435141 Glycine max
Glyma.19G132900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39425142-39435141 Glycine max
Glyma.19G132900 10.0kb downstream 10.0kb downstream 15592 true Chr19: 39409550-39425141 Glycine max
Glyma.19G132900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39409550-39419549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313566 5265 Fabidae View MSA
124066433 5270 Rosid View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5797 0.0 33.7776   High
cufflinks 3.07484 0.0 8.66891    
cufflinks 35.3384 0.0 105.344 High High
cufflinks 3.17485 0.0 8.91576    
cufflinks 2.88115 0.0 8.20209    
cufflinks 5.6823 0.0 15.3045    
cufflinks 1.8311 0.0 5.52488    
cufflinks 1.37387 0.0 4.29999   Low
cufflinks 4.19433 0.0 11.4989    
cufflinks 3.726       Low
cufflinks 98.621     High High
cufflinks 16.697     High  
cufflinks 4.783       Low
cufflinks 4.605       Low
cufflinks 109.552     High High
cufflinks 20.418     High  
cufflinks 9.716     High  
cufflinks 7.267        
cufflinks 6.698        
cufflinks 24.554     High  
cufflinks 67.049     High High
cufflinks 10.433     High  
cufflinks 7.013        
cufflinks 70.274     High High
cufflinks 26.384     High  
cufflinks 40.161     High  

0 Strain