Gene : Glyma.04G116500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN Genomic Order:  1165
Name:  ? Glyma.04G116500 Secondary Identifier:  ? PAC:30487771
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G116500 0.5kb upstream 0.5kb upstream 6696 true Chr04: 13488183-13494878 Glycine max
Glyma.04G116500 0.5kb upstream 0.5kb upstream 500 false Chr04: 13494379-13494878 Glycine max
Glyma.04G116500 0.5kb downstream 0.5kb downstream 6696 true Chr04: 13487683-13494378 Glycine max
Glyma.04G116500 0.5kb downstream 0.5kb downstream 500 false Chr04: 13487683-13488182 Glycine max
Glyma.04G116500 1.0kb upstream 1.0kb upstream 7196 true Chr04: 13488183-13495378 Glycine max
Glyma.04G116500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13494379-13495378 Glycine max
Glyma.04G116500 1.0kb downstream 1.0kb downstream 7196 true Chr04: 13487183-13494378 Glycine max
Glyma.04G116500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13487183-13488182 Glycine max
Glyma.04G116500 2.0kb upstream 2.0kb upstream 8196 true Chr04: 13488183-13496378 Glycine max
Glyma.04G116500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13494379-13496378 Glycine max
Glyma.04G116500 2.0kb downstream 2.0kb downstream 8196 true Chr04: 13486183-13494378 Glycine max
Glyma.04G116500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13486183-13488182 Glycine max
Glyma.04G116500 5.0kb upstream 5.0kb upstream 11196 true Chr04: 13488183-13499378 Glycine max
Glyma.04G116500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13494379-13499378 Glycine max
Glyma.04G116500 5.0kb downstream 5.0kb downstream 11196 true Chr04: 13483183-13494378 Glycine max
Glyma.04G116500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13483183-13488182 Glycine max
Glyma.04G116500 10.0kb upstream 10.0kb upstream 16196 true Chr04: 13488183-13504378 Glycine max
Glyma.04G116500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13494379-13504378 Glycine max
Glyma.04G116500 10.0kb downstream 10.0kb downstream 16196 true Chr04: 13478183-13494378 Glycine max
Glyma.04G116500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13478183-13488182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314471 5265 Fabidae View MSA
124068894 5270 Rosid View MSA
123744491 5271 Pentapetalae View MSA
122791485 5272 Eudicot View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.6657 0.0 431.764 High Low
cufflinks 106.199 0.0 583.218 High  
cufflinks 92.4853 0.0 486.005 High  
cufflinks 90.924 0.0 472.457 High  
cufflinks 101.893 0.0 552.826 High  
cufflinks 135.753 0.0 836.866 High High
cufflinks 121.422 0.0 709.273 High High
cufflinks 98.0764 0.0 525.443 High  
cufflinks 95.8973 0.0 506.9 High  
cufflinks 7.413        
cufflinks 3.375       Low
cufflinks 5.481        
cufflinks 7.714     High  
cufflinks 8.001     High  
cufflinks 3.742       Low
cufflinks 7.491     High  
cufflinks 5.222        
cufflinks 6.483        
cufflinks 6.629        
cufflinks 7.928     High  
cufflinks 4.037       Low
cufflinks 7.513     High  
cufflinks 7.142        
cufflinks 3.296       Low
cufflinks 8.51     High High
cufflinks 4.992        

0 Strain