Gene : Glyma.19G133800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1338
Name:  ? Glyma.19G133800 Secondary Identifier:  ? PAC:30512712
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G133800 0.5kb upstream 0.5kb upstream 2402 true Chr19: 39487615-39490016 Glycine max
Glyma.19G133800 0.5kb upstream 0.5kb upstream 500 false Chr19: 39487615-39488114 Glycine max
Glyma.19G133800 0.5kb downstream 0.5kb downstream 2402 true Chr19: 39488115-39490516 Glycine max
Glyma.19G133800 0.5kb downstream 0.5kb downstream 500 false Chr19: 39490017-39490516 Glycine max
Glyma.19G133800 1.0kb upstream 1.0kb upstream 2902 true Chr19: 39487115-39490016 Glycine max
Glyma.19G133800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39487115-39488114 Glycine max
Glyma.19G133800 1.0kb downstream 1.0kb downstream 2902 true Chr19: 39488115-39491016 Glycine max
Glyma.19G133800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39490017-39491016 Glycine max
Glyma.19G133800 2.0kb upstream 2.0kb upstream 3902 true Chr19: 39486115-39490016 Glycine max
Glyma.19G133800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39486115-39488114 Glycine max
Glyma.19G133800 2.0kb downstream 2.0kb downstream 3902 true Chr19: 39488115-39492016 Glycine max
Glyma.19G133800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39490017-39492016 Glycine max
Glyma.19G133800 5.0kb upstream 5.0kb upstream 6902 true Chr19: 39483115-39490016 Glycine max
Glyma.19G133800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39483115-39488114 Glycine max
Glyma.19G133800 5.0kb downstream 5.0kb downstream 6902 true Chr19: 39488115-39495016 Glycine max
Glyma.19G133800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39490017-39495016 Glycine max
Glyma.19G133800 10.0kb upstream 10.0kb upstream 11902 true Chr19: 39478115-39490016 Glycine max
Glyma.19G133800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39478115-39488114 Glycine max
Glyma.19G133800 10.0kb downstream 10.0kb downstream 11902 true Chr19: 39488115-39500016 Glycine max
Glyma.19G133800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39490017-39500016 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311432 5265 Fabidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.907 0.0 82.5175 High  
cufflinks 20.1027 0.0 54.4873   Low
cufflinks 81.8018 0.0 226.608 High High
cufflinks 39.1584 0.0 104.553 High  
cufflinks 49.997 0.0 134.435 High  
cufflinks 63.3886 0.0 172.56 High  
cufflinks 23.8585 0.0 64.0965 High Low
cufflinks 96.3402 0.0 272.361 High High
cufflinks 44.858 0.0 120.085 High  
cufflinks 58.999     High High
cufflinks 24.902     High  
cufflinks 30.907     High  
cufflinks 30.975     High  
cufflinks 16.846     High  
cufflinks 10.501     High Low
cufflinks 15.243     High  
cufflinks 53.427     High High
cufflinks 31.544     High  
cufflinks 10.911     High Low
cufflinks 7.903     High Low
cufflinks 19.606     High  
cufflinks 10.521     High Low
cufflinks 19.977     High  
cufflinks 19.845     High  
cufflinks 9.099     High Low
cufflinks 30.338     High  

0 Strain