Gene : Glyma.04G111200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31669:SF44 - FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN Genomic Order:  1112
Name:  ? Glyma.04G111200 Secondary Identifier:  ? PAC:30490281
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G111200 0.5kb upstream 0.5kb upstream 7544 true Chr04: 12284339-12291882 Glycine max
Glyma.04G111200 0.5kb upstream 0.5kb upstream 500 false Chr04: 12284339-12284838 Glycine max
Glyma.04G111200 0.5kb downstream 0.5kb downstream 7544 true Chr04: 12284839-12292382 Glycine max
Glyma.04G111200 0.5kb downstream 0.5kb downstream 500 false Chr04: 12291883-12292382 Glycine max
Glyma.04G111200 1.0kb upstream 1.0kb upstream 8044 true Chr04: 12283839-12291882 Glycine max
Glyma.04G111200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12283839-12284838 Glycine max
Glyma.04G111200 1.0kb downstream 1.0kb downstream 8044 true Chr04: 12284839-12292882 Glycine max
Glyma.04G111200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12291883-12292882 Glycine max
Glyma.04G111200 2.0kb upstream 2.0kb upstream 9044 true Chr04: 12282839-12291882 Glycine max
Glyma.04G111200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12282839-12284838 Glycine max
Glyma.04G111200 2.0kb downstream 2.0kb downstream 9044 true Chr04: 12284839-12293882 Glycine max
Glyma.04G111200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12291883-12293882 Glycine max
Glyma.04G111200 5.0kb upstream 5.0kb upstream 12044 true Chr04: 12279839-12291882 Glycine max
Glyma.04G111200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12279839-12284838 Glycine max
Glyma.04G111200 5.0kb downstream 5.0kb downstream 12044 true Chr04: 12284839-12296882 Glycine max
Glyma.04G111200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12291883-12296882 Glycine max
Glyma.04G111200 10.0kb upstream 10.0kb upstream 17044 true Chr04: 12274839-12291882 Glycine max
Glyma.04G111200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12274839-12284838 Glycine max
Glyma.04G111200 10.0kb downstream 10.0kb downstream 17044 true Chr04: 12284839-12301882 Glycine max
Glyma.04G111200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12291883-12301882 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299231 5265 Fabidae View MSA
124072842 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.20065 0.0 16.673    
cufflinks 4.24627 0.0 24.6165   High
cufflinks 2.92072 0.0 18.4806    
cufflinks 3.22288 0.0 19.8314    
cufflinks 2.73889 0.0 16.5383    
cufflinks 1.11211 0.0 8.46597   Low
cufflinks 3.76018 0.0 20.6992    
cufflinks 2.55989 0.0 15.92    
cufflinks 3.37046 0.0 19.3628    
cufflinks 0.071     Low  
cufflinks 0.029     Low Low
cufflinks 0.23        
cufflinks 0.079     Low  
cufflinks 0.129        
cufflinks 0.102        
cufflinks 0.17        
cufflinks 0.03     Low Low
cufflinks 0.322       High
cufflinks 0.228        
cufflinks 0.208        
cufflinks 0.034     Low Low
cufflinks 0.231        
cufflinks 0.181        
cufflinks 0.035     Low Low
cufflinks 0.202        
cufflinks 0.028     Low Low

0 Strain