Gene : Glyma.04G110900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12953:SF1 - GALACTOSE-BINDING PROTEIN Genomic Order:  1109
Name:  ? Glyma.04G110900 Secondary Identifier:  ? PAC:30490474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G110900 0.5kb upstream 0.5kb upstream 5809 true Chr04: 12249472-12255280 Glycine max
Glyma.04G110900 0.5kb upstream 0.5kb upstream 500 false Chr04: 12254781-12255280 Glycine max
Glyma.04G110900 0.5kb downstream 0.5kb downstream 5809 true Chr04: 12248972-12254780 Glycine max
Glyma.04G110900 0.5kb downstream 0.5kb downstream 500 false Chr04: 12248972-12249471 Glycine max
Glyma.04G110900 1.0kb upstream 1.0kb upstream 6309 true Chr04: 12249472-12255780 Glycine max
Glyma.04G110900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12254781-12255780 Glycine max
Glyma.04G110900 1.0kb downstream 1.0kb downstream 6309 true Chr04: 12248472-12254780 Glycine max
Glyma.04G110900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12248472-12249471 Glycine max
Glyma.04G110900 2.0kb upstream 2.0kb upstream 7309 true Chr04: 12249472-12256780 Glycine max
Glyma.04G110900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12254781-12256780 Glycine max
Glyma.04G110900 2.0kb downstream 2.0kb downstream 7309 true Chr04: 12247472-12254780 Glycine max
Glyma.04G110900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12247472-12249471 Glycine max
Glyma.04G110900 5.0kb upstream 5.0kb upstream 10309 true Chr04: 12249472-12259780 Glycine max
Glyma.04G110900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12254781-12259780 Glycine max
Glyma.04G110900 5.0kb downstream 5.0kb downstream 10309 true Chr04: 12244472-12254780 Glycine max
Glyma.04G110900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12244472-12249471 Glycine max
Glyma.04G110900 10.0kb upstream 10.0kb upstream 15309 true Chr04: 12249472-12264780 Glycine max
Glyma.04G110900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12254781-12264780 Glycine max
Glyma.04G110900 10.0kb downstream 10.0kb downstream 15309 true Chr04: 12239472-12254780 Glycine max
Glyma.04G110900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12239472-12249471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310796 5265 Fabidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33754 0.0 14.4497   Low
cufflinks 3.32811 0.0 14.5424    
cufflinks 1.95524 0.0 11.3559   Low
cufflinks 4.30107 0.0 21.3126    
cufflinks 6.13534 0.0 30.2523    
cufflinks 8.76803 0.0 43.3566   High
cufflinks 3.01843 0.0 13.931    
cufflinks 7.30166 0.0 34.5514   High
cufflinks 4.48203 0.0 20.2483    
cufflinks 1.429       High
cufflinks 0.185       Low
cufflinks 0.276        
cufflinks 0.635        
cufflinks 0.719       High
cufflinks 0.787       High
cufflinks 0.287        
cufflinks 0.887       High
cufflinks 0.278        
cufflinks 0.355        
cufflinks 0.188       Low
cufflinks 0.276        
cufflinks 0.24        
cufflinks 0.331        
cufflinks 0.177       Low
cufflinks 0.186       Low
cufflinks 0.498        

0 Strain